Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Hoxd8P23463 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.06□□□□□ -0.16
Hoxd8P23463 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxd8P23463 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxd8P23463 Gm12176-201ENSMUST00000121420 875 ntBASIC14.06□□□□□ -0.16
Hoxd8P23463 Gm2231-201ENSMUST00000125661 612 ntBASIC14.06□□□□□ -0.16
Hoxd8P23463 Gm25261-201ENSMUST00000157416 134 ntBASIC14.06□□□□□ -0.16
Hoxd8P23463 Gm25927-201ENSMUST00000175058 117 ntBASIC14.06□□□□□ -0.16
Hoxd8P23463 Gm37008-201ENSMUST00000195712 319 ntBASIC14.06□□□□□ -0.16
Hoxd8P23463 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Hoxd8P23463 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxd8P23463 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Hoxd8P23463 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.05□□□□□ -0.16
Hoxd8P23463 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxd8P23463 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxd8P23463 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Hoxd8P23463 Gm11637-201ENSMUST00000120601 592 ntBASIC14.05□□□□□ -0.16
Hoxd8P23463 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Gm9823-201ENSMUST00000051212 327 ntBASIC14.05□□□□□ -0.16
Hoxd8P23463 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxd8P23463 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxd8P23463 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.05□□□□□ -0.16
Hoxd8P23463 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxd8P23463 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxd8P23463 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxd8P23463 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxd8P23463 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxd8P23463 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxd8P23463 Gm12106-201ENSMUST00000116006 1200 ntBASIC14.04□□□□□ -0.16
Hoxd8P23463 Gm16202-201ENSMUST00000117532 544 ntBASIC14.04□□□□□ -0.16
Hoxd8P23463 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.04□□□□□ -0.16
Hoxd8P23463 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxd8P23463 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.04□□□□□ -0.16
Hoxd8P23463 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.04□□□□□ -0.16
Hoxd8P23463 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.04□□□□□ -0.16
Hoxd8P23463 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxd8P23463 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxd8P23463 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxd8P23463 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxd8P23463 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxd8P23463 Mir686-201ENSMUST00000102174 109 ntBASIC14.03□□□□□ -0.16
Hoxd8P23463 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.03□□□□□ -0.16
Hoxd8P23463 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.03□□□□□ -0.16
Hoxd8P23463 Mir5132-201ENSMUST00000175166 71 ntBASIC14.03□□□□□ -0.16
Hoxd8P23463 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms