Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm10434-201ENSMUST00000101158 471 ntBASIC15.83■□□□□ 0.12
Col1a1P11087 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col1a1P11087 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.83■□□□□ 0.12
Col1a1P11087 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col1a1P11087 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.83■□□□□ 0.12
Col1a1P11087 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.83■□□□□ 0.12
Col1a1P11087 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.83■□□□□ 0.12
Col1a1P11087 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col1a1P11087 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.83■□□□□ 0.12
Col1a1P11087 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col1a1P11087 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col1a1P11087 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col1a1P11087 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col1a1P11087 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col1a1P11087 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col1a1P11087 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Col1a1P11087 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.82■□□□□ 0.12
Col1a1P11087 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col1a1P11087 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col1a1P11087 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Col1a1P11087 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col1a1P11087 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Col1a1P11087 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col1a1P11087 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Gm14726-201ENSMUST00000120623 896 ntBASIC15.82■□□□□ 0.12
Col1a1P11087 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Col1a1P11087 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col1a1P11087 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col1a1P11087 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col1a1P11087 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col1a1P11087 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.82■□□□□ 0.12
Col1a1P11087 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.82■□□□□ 0.12
Col1a1P11087 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.82■□□□□ 0.12
Col1a1P11087 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col1a1P11087 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.81■□□□□ 0.12
Col1a1P11087 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.81■□□□□ 0.12
Col1a1P11087 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Col1a1P11087 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Gm14017-201ENSMUST00000121934 386 ntBASIC15.81■□□□□ 0.12
Col1a1P11087 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.81■□□□□ 0.12
Col1a1P11087 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.81■□□□□ 0.12
Col1a1P11087 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.81■□□□□ 0.12
Col1a1P11087 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col1a1P11087 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col1a1P11087 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col1a1P11087 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.8■□□□□ 0.12
Col1a1P11087 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.8■□□□□ 0.12
Col1a1P11087 Gm12134-201ENSMUST00000122109 520 ntBASIC15.8■□□□□ 0.12
Col1a1P11087 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.8■□□□□ 0.12
Col1a1P11087 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Col1a1P11087 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Col1a1P11087 Gm45186-201ENSMUST00000206874 478 ntBASIC15.8■□□□□ 0.12
Col1a1P11087 Gm30285-201ENSMUST00000214614 422 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms