Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm15376-201ENSMUST00000122258 783 ntBASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm25318-201ENSMUST00000122554 314 ntBASIC11.49□□□□□ -0.57
Ly6c1P0CW02 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Mir6392-201ENSMUST00000184924 108 ntBASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm45359-201ENSMUST00000210635 427 ntBASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm19220-201ENSMUST00000222682 803 ntBASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ly6c1P0CW02 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gm12341-201ENSMUST00000119724 503 ntBASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gm45668-201ENSMUST00000211271 493 ntBASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.48□□□□□ -0.57
Ly6c1P0CW02 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gm6180-201ENSMUST00000065243 498 ntBASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ly6c1P0CW02 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms