Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc9P09633 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Gm16202-201ENSMUST00000117532 544 ntBASIC17.63■□□□□ 0.41
Hoxc9P09633 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Hoxc9P09633 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.63■□□□□ 0.41
Hoxc9P09633 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Gm27243-201ENSMUST00000183964 521 ntBASIC17.63■□□□□ 0.41
Hoxc9P09633 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.63■□□□□ 0.41
Hoxc9P09633 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.63■□□□□ 0.41
Hoxc9P09633 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hoxc9P09633 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.63■□□□□ 0.41
Hoxc9P09633 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc9P09633 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.63■□□□□ 0.41
Hoxc9P09633 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc9P09633 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.62■□□□□ 0.41
Hoxc9P09633 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Gm11591-201ENSMUST00000120063 702 ntBASIC17.62■□□□□ 0.41
Hoxc9P09633 Gm13786-201ENSMUST00000122371 333 ntBASIC17.62■□□□□ 0.41
Hoxc9P09633 Gm2231-201ENSMUST00000125661 612 ntBASIC17.62■□□□□ 0.41
Hoxc9P09633 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.62■□□□□ 0.41
Hoxc9P09633 Gm29396-201ENSMUST00000185659 716 ntBASIC17.62■□□□□ 0.41
Hoxc9P09633 Gm6334-201ENSMUST00000207083 228 ntBASIC17.62■□□□□ 0.41
Hoxc9P09633 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hoxc9P09633 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hoxc9P09633 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.62■□□□□ 0.41
Hoxc9P09633 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hoxc9P09633 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.62■□□□□ 0.41
Hoxc9P09633 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hoxc9P09633 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.62■□□□□ 0.41
Hoxc9P09633 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc9P09633 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.61■□□□□ 0.41
Hoxc9P09633 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.61■□□□□ 0.41
Hoxc9P09633 Gm16479-201ENSMUST00000121706 932 ntBASIC17.61■□□□□ 0.41
Hoxc9P09633 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Gm16379-201ENSMUST00000161469 348 ntBASIC17.61■□□□□ 0.41
Hoxc9P09633 Gm8762-201ENSMUST00000193486 339 ntBASIC17.61■□□□□ 0.41
Hoxc9P09633 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Hoxc9P09633 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hoxc9P09633 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hoxc9P09633 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc9P09633 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hoxc9P09633 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Hoxc9P09633 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.6■□□□□ 0.41
Hoxc9P09633 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.6■□□□□ 0.41
Hoxc9P09633 Gm45865-201ENSMUST00000211815 945 ntBASIC17.6■□□□□ 0.41
Hoxc9P09633 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.6■□□□□ 0.41
Hoxc9P09633 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hoxc9P09633 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms