Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Hoxa4P06798 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa4P06798 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa4P06798 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Gm15429-201ENSMUST00000151268 798 ntBASIC13.46□□□□□ -0.25
Hoxa4P06798 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Gm2495-201ENSMUST00000191160 466 ntBASIC13.46□□□□□ -0.25
Hoxa4P06798 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.46□□□□□ -0.25
Hoxa4P06798 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Hoxa4P06798 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa4P06798 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.46□□□□□ -0.25
Hoxa4P06798 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Hoxa4P06798 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa4P06798 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa4P06798 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa4P06798 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa4P06798 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa4P06798 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa4P06798 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa4P06798 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa4P06798 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa4P06798 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.45□□□□□ -0.26
Hoxa4P06798 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.45□□□□□ -0.26
Hoxa4P06798 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.45□□□□□ -0.26
Hoxa4P06798 Gm45384-201ENSMUST00000210451 277 ntBASIC13.45□□□□□ -0.26
Hoxa4P06798 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.45□□□□□ -0.26
Hoxa4P06798 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa4P06798 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa4P06798 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa4P06798 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa4P06798 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.44□□□□□ -0.26
Hoxa4P06798 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hoxa4P06798 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.44□□□□□ -0.26
Hoxa4P06798 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hoxa4P06798 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Hoxa4P06798 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Hoxa4P06798 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.44□□□□□ -0.26
Hoxa4P06798 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.44□□□□□ -0.26
Hoxa4P06798 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Hoxa4P06798 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.44□□□□□ -0.26
Hoxa4P06798 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.44□□□□□ -0.26
Hoxa4P06798 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Hoxa4P06798 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hoxa4P06798 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxa4P06798 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms