Protein–RNA interactions for Protein: O88255

Gm10509, Mszf57 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10509O88255 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Gm10509O88255 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Gm10509O88255 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Gm10509O88255 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
Gm10509O88255 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Gm10509O88255 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Gm10509O88255 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Gm10509O88255 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Gm10509O88255 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.77□□□□□ -0.85
Gm10509O88255 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 Gm15393-201ENSMUST00000120499 219 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Gm10509O88255 Gm10766-202ENSMUST00000194123 606 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 Gm2213-201ENSMUST00000197485 688 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 Gm46209-201ENSMUST00000217912 553 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.77□□□□□ -0.85
Gm10509O88255 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Gm10509O88255 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Gm10509O88255 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Gm10509O88255 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC9.77□□□□□ -0.85
Gm10509O88255 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Gm12500-202ENSMUST00000186471 2428 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Gm10509O88255 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Gm42928-201ENSMUST00000197338 3339 ntBASIC9.77□□□□□ -0.85
Gm10509O88255 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Gm10509O88255 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Gm10509O88255 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Gm10509O88255 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9.76□□□□□ -0.85
Gm10509O88255 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.76□□□□□ -0.85
Gm10509O88255 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Gm10509O88255 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Gm10509O88255 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC9.76□□□□□ -0.85
Gm10509O88255 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Gm7336-201ENSMUST00000107041 1232 ntBASIC9.76□□□□□ -0.85
Gm10509O88255 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Gm12585-201ENSMUST00000117307 290 ntBASIC9.76□□□□□ -0.85
Gm10509O88255 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.76□□□□□ -0.85
Gm10509O88255 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC9.76□□□□□ -0.85
Gm10509O88255 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Gm24420-201ENSMUST00000176676 59 ntBASIC9.76□□□□□ -0.85
Gm10509O88255 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Gm10509O88255 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.76□□□□□ -0.85
Gm10509O88255 AC151286.1-201ENSMUST00000198489 145 ntBASIC9.76□□□□□ -0.85
Gm10509O88255 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm10509O88255 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.76□□□□□ -0.85
Gm10509O88255 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms