Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Atf6F6VAN0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atf6F6VAN0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.08□□□□□ -0.16
Atf6F6VAN0 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.08□□□□□ -0.16
Atf6F6VAN0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.08□□□□□ -0.16
Atf6F6VAN0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf6F6VAN0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.07□□□□□ -0.16
Atf6F6VAN0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.07□□□□□ -0.16
Atf6F6VAN0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.07□□□□□ -0.16
Atf6F6VAN0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atf6F6VAN0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms