Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hfm1D3Z4R1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hfm1D3Z4R1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hfm1D3Z4R1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hfm1D3Z4R1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hfm1D3Z4R1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hfm1D3Z4R1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 AC154595.3-201ENSMUST00000224579 384 ntBASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Gm19221-201ENSMUST00000221827 1477 ntBASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hfm1D3Z4R1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Hfm1D3Z4R1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hfm1D3Z4R1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Gm5523-201ENSMUST00000180415 997 ntBASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Gm2546-201ENSMUST00000182630 991 ntBASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Gm19963-201ENSMUST00000208413 1255 ntBASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms