Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Gm1401-201ENSMUST00000122048 772 ntBASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Rprl2-201ENSMUST00000157150 290 ntBASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav12d-1A0N8R0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Gm5364-201ENSMUST00000216789 889 ntBASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
Trav12d-1A0N8R0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms