Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm8927-201ENSMUST00000181978 981 ntBASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm27989-201ENSMUST00000184721 107 ntBASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm3222-201ENSMUST00000071282 990 ntBASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.4□□□□□ -0.58
Lnp1A0A1B0GSK3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lnp1A0A1B0GSK3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lnp1A0A1B0GSK3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lnp1A0A1B0GSK3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lnp1A0A1B0GSK3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lnp1A0A1B0GSK3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lnp1A0A1B0GSK3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lnp1A0A1B0GSK3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lnp1A0A1B0GSK3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lnp1A0A1B0GSK3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms