Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm22065-201ENSMUST00000103753 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm22066-201ENSMUST00000103761 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm24932-201ENSMUST00000103763 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm24115-201ENSMUST00000103799 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm22190-201ENSMUST00000103827 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm22191-201ENSMUST00000103831 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm24721-201ENSMUST00000103849 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm28018-201ENSMUST00000103869 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm26399-201ENSMUST00000103937 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm14822-201ENSMUST00000122247 291 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm24158-201ENSMUST00000175263 71 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm25349-201ENSMUST00000177728 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm23616-201ENSMUST00000177797 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm25871-201ENSMUST00000177816 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm24752-201ENSMUST00000178240 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm24496-201ENSMUST00000178287 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm25649-201ENSMUST00000178476 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm25548-201ENSMUST00000178681 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm23147-201ENSMUST00000178841 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm26095-201ENSMUST00000179270 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm22171-201ENSMUST00000179283 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm23936-201ENSMUST00000179354 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm22619-201ENSMUST00000179516 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm25255-201ENSMUST00000179579 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm24755-201ENSMUST00000179691 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm26506-201ENSMUST00000179692 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm25086-201ENSMUST00000179931 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm23243-201ENSMUST00000180047 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm24659-201ENSMUST00000180212 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm24169-201ENSMUST00000180244 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm23689-201ENSMUST00000180354 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm27359-201ENSMUST00000184153 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm27785-201ENSMUST00000184268 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm27466-201ENSMUST00000184396 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm27703-201ENSMUST00000184836 110 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.23□□□□□ -0.61
Trav18A0A075B656 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gm24543-201ENSMUST00000103867 82 ntBASIC11.22□□□□□ -0.61
Trav18A0A075B656 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gm12428-201ENSMUST00000119844 727 ntBASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms