Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.34■□□□□ 0.69
H2afb3S4R1G7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb3S4R1G7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
H2afb3S4R1G7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.33■□□□□ 0.68
H2afb3S4R1G7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb3S4R1G7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
H2afb3S4R1G7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb3S4R1G7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb3S4R1G7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb3S4R1G7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb3S4R1G7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
H2afb3S4R1G7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
H2afb3S4R1G7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb3S4R1G7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
H2afb3S4R1G7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb3S4R1G7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb3S4R1G7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb3S4R1G7 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.31■□□□□ 0.68
H2afb3S4R1G7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb3S4R1G7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
H2afb3S4R1G7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
H2afb3S4R1G7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.3■□□□□ 0.68
H2afb3S4R1G7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb3S4R1G7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb3S4R1G7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.3■□□□□ 0.68
H2afb3S4R1G7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb3S4R1G7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.3■□□□□ 0.68
H2afb3S4R1G7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb3S4R1G7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb3S4R1G7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb3S4R1G7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb3S4R1G7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb3S4R1G7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.29■□□□□ 0.68
H2afb3S4R1G7 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.29■□□□□ 0.68
H2afb3S4R1G7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb3S4R1G7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb3S4R1G7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
H2afb3S4R1G7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb3S4R1G7 Scarna2-201ENSMUST00000157560 414 ntBASIC19.28■□□□□ 0.68
H2afb3S4R1G7 Gm9806-201ENSMUST00000051080 552 ntBASIC19.28■□□□□ 0.68
H2afb3S4R1G7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb3S4R1G7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb3S4R1G7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
H2afb3S4R1G7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb3S4R1G7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H2afb3S4R1G7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
H2afb3S4R1G7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afb3S4R1G7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2afb3S4R1G7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2afb3S4R1G7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
H2afb3S4R1G7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb3S4R1G7 Gm16437-201ENSMUST00000025669 507 ntBASIC19.26■□□□□ 0.67
H2afb3S4R1G7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb3S4R1G7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb3S4R1G7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb3S4R1G7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
H2afb3S4R1G7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb3S4R1G7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb3S4R1G7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.25■□□□□ 0.67
H2afb3S4R1G7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.25■□□□□ 0.67
H2afb3S4R1G7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
H2afb3S4R1G7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb3S4R1G7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb3S4R1G7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb3S4R1G7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb3S4R1G7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.24■□□□□ 0.67
H2afb3S4R1G7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb3S4R1G7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb3S4R1G7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb3S4R1G7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Gm11687-201ENSMUST00000118911 886 ntBASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
H2afb3S4R1G7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb3S4R1G7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb3S4R1G7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb3S4R1G7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.22■□□□□ 0.67
H2afb3S4R1G7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.22■□□□□ 0.67
H2afb3S4R1G7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb3S4R1G7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb3S4R1G7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb3S4R1G7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
H2afb3S4R1G7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb3S4R1G7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb3S4R1G7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb3S4R1G7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb3S4R1G7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.21■□□□□ 0.67
H2afb3S4R1G7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb3S4R1G7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb3S4R1G7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms