Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nubp1Q9R060 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nubp1Q9R060 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nubp1Q9R060 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nubp1Q9R060 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nubp1Q9R060 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nubp1Q9R060 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nubp1Q9R060 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nubp1Q9R060 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.79■□□□□ 0.6
Nubp1Q9R060 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.79■□□□□ 0.6
Nubp1Q9R060 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nubp1Q9R060 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nubp1Q9R060 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nubp1Q9R060 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nubp1Q9R060 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nubp1Q9R060 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.78■□□□□ 0.6
Nubp1Q9R060 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.78■□□□□ 0.6
Nubp1Q9R060 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nubp1Q9R060 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nubp1Q9R060 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.78■□□□□ 0.6
Nubp1Q9R060 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nubp1Q9R060 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nubp1Q9R060 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Nubp1Q9R060 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nubp1Q9R060 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Nubp1Q9R060 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nubp1Q9R060 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Nubp1Q9R060 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nubp1Q9R060 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nubp1Q9R060 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nubp1Q9R060 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nubp1Q9R060 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nubp1Q9R060 Gm8495-201ENSMUST00000188740 694 ntBASIC18.75■□□□□ 0.59
Nubp1Q9R060 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.75■□□□□ 0.59
Nubp1Q9R060 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nubp1Q9R060 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nubp1Q9R060 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.74■□□□□ 0.59
Nubp1Q9R060 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nubp1Q9R060 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nubp1Q9R060 Gm27454-201ENSMUST00000185090 204 ntBASIC18.74■□□□□ 0.59
Nubp1Q9R060 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nubp1Q9R060 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nubp1Q9R060 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nubp1Q9R060 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nubp1Q9R060 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nubp1Q9R060 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.73■□□□□ 0.59
Nubp1Q9R060 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.73■□□□□ 0.59
Nubp1Q9R060 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nubp1Q9R060 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nubp1Q9R060 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.73■□□□□ 0.59
Nubp1Q9R060 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nubp1Q9R060 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nubp1Q9R060 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.72■□□□□ 0.59
Nubp1Q9R060 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nubp1Q9R060 Gm10399-202ENSMUST00000202768 748 ntBASIC18.72■□□□□ 0.59
Nubp1Q9R060 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.72■□□□□ 0.59
Nubp1Q9R060 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nubp1Q9R060 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nubp1Q9R060 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nubp1Q9R060 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nubp1Q9R060 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nubp1Q9R060 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nubp1Q9R060 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nubp1Q9R060 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.71■□□□□ 0.59
Nubp1Q9R060 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nubp1Q9R060 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nubp1Q9R060 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.7■□□□□ 0.58
Nubp1Q9R060 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nubp1Q9R060 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nubp1Q9R060 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nubp1Q9R060 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nubp1Q9R060 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Nubp1Q9R060 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Nubp1Q9R060 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nubp1Q9R060 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.69■□□□□ 0.58
Nubp1Q9R060 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nubp1Q9R060 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nubp1Q9R060 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nubp1Q9R060 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nubp1Q9R060 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nubp1Q9R060 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nubp1Q9R060 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
Nubp1Q9R060 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.68■□□□□ 0.58
Nubp1Q9R060 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.68■□□□□ 0.58
Nubp1Q9R060 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.68■□□□□ 0.58
Nubp1Q9R060 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nubp1Q9R060 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nubp1Q9R060 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nubp1Q9R060 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.67■□□□□ 0.58
Nubp1Q9R060 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nubp1Q9R060 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.67■□□□□ 0.58
Nubp1Q9R060 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nubp1Q9R060 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nubp1Q9R060 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nubp1Q9R060 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nubp1Q9R060 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nubp1Q9R060 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nubp1Q9R060 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nubp1Q9R060 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nubp1Q9R060 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms