Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sec61a2Q9JLR1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sec61a2Q9JLR1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Sec61a2Q9JLR1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.33■□□□□ 0.68
Sec61a2Q9JLR1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sec61a2Q9JLR1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec61a2Q9JLR1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec61a2Q9JLR1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.31■□□□□ 0.68
Sec61a2Q9JLR1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sec61a2Q9JLR1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a2Q9JLR1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a2Q9JLR1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a2Q9JLR1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a2Q9JLR1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a2Q9JLR1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a2Q9JLR1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a2Q9JLR1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec61a2Q9JLR1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec61a2Q9JLR1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec61a2Q9JLR1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.28■□□□□ 0.68
Sec61a2Q9JLR1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.28■□□□□ 0.68
Sec61a2Q9JLR1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.28■□□□□ 0.68
Sec61a2Q9JLR1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec61a2Q9JLR1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.28■□□□□ 0.68
Sec61a2Q9JLR1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec61a2Q9JLR1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sec61a2Q9JLR1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sec61a2Q9JLR1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sec61a2Q9JLR1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sec61a2Q9JLR1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.27■□□□□ 0.68
Sec61a2Q9JLR1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec61a2Q9JLR1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sec61a2Q9JLR1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec61a2Q9JLR1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec61a2Q9JLR1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sec61a2Q9JLR1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sec61a2Q9JLR1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec61a2Q9JLR1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec61a2Q9JLR1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec61a2Q9JLR1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sec61a2Q9JLR1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sec61a2Q9JLR1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec61a2Q9JLR1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec61a2Q9JLR1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec61a2Q9JLR1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec61a2Q9JLR1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec61a2Q9JLR1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sec61a2Q9JLR1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec61a2Q9JLR1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sec61a2Q9JLR1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec61a2Q9JLR1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec61a2Q9JLR1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sec61a2Q9JLR1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sec61a2Q9JLR1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec61a2Q9JLR1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms