Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tdp2Q9JJX7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tdp2Q9JJX7 Scarna2-201ENSMUST00000157560 414 ntBASIC21.33■■□□□ 1.01
Tdp2Q9JJX7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.33■■□□□ 1
Tdp2Q9JJX7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Tdp2Q9JJX7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tdp2Q9JJX7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tdp2Q9JJX7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.32■■□□□ 1
Tdp2Q9JJX7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tdp2Q9JJX7 Gm11687-201ENSMUST00000118911 886 ntBASIC21.31■■□□□ 1
Tdp2Q9JJX7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tdp2Q9JJX7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tdp2Q9JJX7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tdp2Q9JJX7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.3■■□□□ 1
Tdp2Q9JJX7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tdp2Q9JJX7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.29■■□□□ 1
Tdp2Q9JJX7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tdp2Q9JJX7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tdp2Q9JJX7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.29■■□□□ 1
Tdp2Q9JJX7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tdp2Q9JJX7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tdp2Q9JJX7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.29■■□□□ 1
Tdp2Q9JJX7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tdp2Q9JJX7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tdp2Q9JJX7 Gm9806-201ENSMUST00000051080 552 ntBASIC21.28■■□□□ 1
Tdp2Q9JJX7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Tdp2Q9JJX7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tdp2Q9JJX7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.27■■□□□ 1
Tdp2Q9JJX7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tdp2Q9JJX7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.27■■□□□ 1
Tdp2Q9JJX7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tdp2Q9JJX7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tdp2Q9JJX7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tdp2Q9JJX7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tdp2Q9JJX7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tdp2Q9JJX7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Tdp2Q9JJX7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tdp2Q9JJX7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Tdp2Q9JJX7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tdp2Q9JJX7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tdp2Q9JJX7 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.26■□□□□ 0.99
Tdp2Q9JJX7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tdp2Q9JJX7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.26■□□□□ 0.99
Tdp2Q9JJX7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tdp2Q9JJX7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Tdp2Q9JJX7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tdp2Q9JJX7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tdp2Q9JJX7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tdp2Q9JJX7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Tdp2Q9JJX7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Tdp2Q9JJX7 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.23■□□□□ 0.99
Tdp2Q9JJX7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.23■□□□□ 0.99
Tdp2Q9JJX7 Gm16437-201ENSMUST00000025669 507 ntBASIC21.23■□□□□ 0.99
Tdp2Q9JJX7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tdp2Q9JJX7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tdp2Q9JJX7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Tdp2Q9JJX7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tdp2Q9JJX7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tdp2Q9JJX7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Tdp2Q9JJX7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Tdp2Q9JJX7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tdp2Q9JJX7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp2Q9JJX7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp2Q9JJX7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp2Q9JJX7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp2Q9JJX7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Tdp2Q9JJX7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp2Q9JJX7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp2Q9JJX7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp2Q9JJX7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tdp2Q9JJX7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tdp2Q9JJX7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Tdp2Q9JJX7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.19■□□□□ 0.98
Tdp2Q9JJX7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tdp2Q9JJX7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Tdp2Q9JJX7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tdp2Q9JJX7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tdp2Q9JJX7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tdp2Q9JJX7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tdp2Q9JJX7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tdp2Q9JJX7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tdp2Q9JJX7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tdp2Q9JJX7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tdp2Q9JJX7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tdp2Q9JJX7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.17■□□□□ 0.98
Tdp2Q9JJX7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Tdp2Q9JJX7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tdp2Q9JJX7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms