Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mbd3l1Q9D9H3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Mbd3l1Q9D9H3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mbd3l1Q9D9H3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd3l1Q9D9H3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd3l1Q9D9H3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd3l1Q9D9H3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mbd3l1Q9D9H3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.78■□□□□ 0.6
Mbd3l1Q9D9H3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mbd3l1Q9D9H3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mbd3l1Q9D9H3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mbd3l1Q9D9H3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mbd3l1Q9D9H3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Mbd3l1Q9D9H3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Mbd3l1Q9D9H3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mbd3l1Q9D9H3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mbd3l1Q9D9H3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mbd3l1Q9D9H3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mbd3l1Q9D9H3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Mbd3l1Q9D9H3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mbd3l1Q9D9H3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Mbd3l1Q9D9H3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mbd3l1Q9D9H3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mbd3l1Q9D9H3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mbd3l1Q9D9H3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mbd3l1Q9D9H3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mbd3l1Q9D9H3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mbd3l1Q9D9H3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mbd3l1Q9D9H3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mbd3l1Q9D9H3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mbd3l1Q9D9H3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mbd3l1Q9D9H3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mbd3l1Q9D9H3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mbd3l1Q9D9H3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mbd3l1Q9D9H3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mbd3l1Q9D9H3 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.71■□□□□ 0.59
Mbd3l1Q9D9H3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mbd3l1Q9D9H3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mbd3l1Q9D9H3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mbd3l1Q9D9H3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Mbd3l1Q9D9H3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mbd3l1Q9D9H3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mbd3l1Q9D9H3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mbd3l1Q9D9H3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mbd3l1Q9D9H3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mbd3l1Q9D9H3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Mbd3l1Q9D9H3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mbd3l1Q9D9H3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mbd3l1Q9D9H3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mbd3l1Q9D9H3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mbd3l1Q9D9H3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mbd3l1Q9D9H3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mbd3l1Q9D9H3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mbd3l1Q9D9H3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Mbd3l1Q9D9H3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mbd3l1Q9D9H3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mbd3l1Q9D9H3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mbd3l1Q9D9H3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mbd3l1Q9D9H3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mbd3l1Q9D9H3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mbd3l1Q9D9H3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mbd3l1Q9D9H3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mbd3l1Q9D9H3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Mbd3l1Q9D9H3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mbd3l1Q9D9H3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Mbd3l1Q9D9H3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mbd3l1Q9D9H3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mbd3l1Q9D9H3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mbd3l1Q9D9H3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms