Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.98■□□□□ 0.63
Ndufa11Q9D8B4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ndufa11Q9D8B4 Gm27454-201ENSMUST00000185090 204 ntBASIC18.98■□□□□ 0.63
Ndufa11Q9D8B4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndufa11Q9D8B4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndufa11Q9D8B4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ndufa11Q9D8B4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
Ndufa11Q9D8B4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ndufa11Q9D8B4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.97■□□□□ 0.63
Ndufa11Q9D8B4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ndufa11Q9D8B4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufa11Q9D8B4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufa11Q9D8B4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufa11Q9D8B4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Ndufa11Q9D8B4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufa11Q9D8B4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufa11Q9D8B4 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.96■□□□□ 0.63
Ndufa11Q9D8B4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufa11Q9D8B4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufa11Q9D8B4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.95■□□□□ 0.62
Ndufa11Q9D8B4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufa11Q9D8B4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.95■□□□□ 0.62
Ndufa11Q9D8B4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ndufa11Q9D8B4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndufa11Q9D8B4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndufa11Q9D8B4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ndufa11Q9D8B4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndufa11Q9D8B4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ndufa11Q9D8B4 Golgb1-201ENSMUST00000023534 498 ntBASIC18.93■□□□□ 0.62
Ndufa11Q9D8B4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndufa11Q9D8B4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ndufa11Q9D8B4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Ndufa11Q9D8B4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndufa11Q9D8B4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ndufa11Q9D8B4 Gm45417-201ENSMUST00000209533 758 ntBASIC18.92■□□□□ 0.62
Ndufa11Q9D8B4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.92■□□□□ 0.62
Ndufa11Q9D8B4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndufa11Q9D8B4 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.91■□□□□ 0.62
Ndufa11Q9D8B4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufa11Q9D8B4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.91■□□□□ 0.62
Ndufa11Q9D8B4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufa11Q9D8B4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ndufa11Q9D8B4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ndufa11Q9D8B4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndufa11Q9D8B4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndufa11Q9D8B4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.89■□□□□ 0.62
Ndufa11Q9D8B4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ndufa11Q9D8B4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufa11Q9D8B4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.88■□□□□ 0.61
Ndufa11Q9D8B4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.88■□□□□ 0.61
Ndufa11Q9D8B4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufa11Q9D8B4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufa11Q9D8B4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufa11Q9D8B4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufa11Q9D8B4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ndufa11Q9D8B4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ndufa11Q9D8B4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ndufa11Q9D8B4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ndufa11Q9D8B4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufa11Q9D8B4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.86■□□□□ 0.61
Ndufa11Q9D8B4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufa11Q9D8B4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufa11Q9D8B4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufa11Q9D8B4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufa11Q9D8B4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufa11Q9D8B4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufa11Q9D8B4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufa11Q9D8B4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndufa11Q9D8B4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.85■□□□□ 0.61
Ndufa11Q9D8B4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.85■□□□□ 0.61
Ndufa11Q9D8B4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ndufa11Q9D8B4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndufa11Q9D8B4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndufa11Q9D8B4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndufa11Q9D8B4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufa11Q9D8B4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufa11Q9D8B4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufa11Q9D8B4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufa11Q9D8B4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufa11Q9D8B4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.84■□□□□ 0.61
Ndufa11Q9D8B4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufa11Q9D8B4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Ndufa11Q9D8B4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.84■□□□□ 0.61
Ndufa11Q9D8B4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ndufa11Q9D8B4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ndufa11Q9D8B4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ndufa11Q9D8B4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms