Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox4aQ9D3I8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rhox4aQ9D3I8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Rhox4aQ9D3I8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox4aQ9D3I8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox4aQ9D3I8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.79■□□□□ 0.44
Rhox4aQ9D3I8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Rhox4aQ9D3I8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox4aQ9D3I8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox4aQ9D3I8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rhox4aQ9D3I8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rhox4aQ9D3I8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rhox4aQ9D3I8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rhox4aQ9D3I8 Nkain2-201ENSMUST00000092602 558 ntBASIC17.77■□□□□ 0.44
Rhox4aQ9D3I8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rhox4aQ9D3I8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.76■□□□□ 0.43
Rhox4aQ9D3I8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rhox4aQ9D3I8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rhox4aQ9D3I8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rhox4aQ9D3I8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rhox4aQ9D3I8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rhox4aQ9D3I8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rhox4aQ9D3I8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rhox4aQ9D3I8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rhox4aQ9D3I8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rhox4aQ9D3I8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rhox4aQ9D3I8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rhox4aQ9D3I8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rhox4aQ9D3I8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rhox4aQ9D3I8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rhox4aQ9D3I8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rhox4aQ9D3I8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rhox4aQ9D3I8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4aQ9D3I8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4aQ9D3I8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4aQ9D3I8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4aQ9D3I8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rhox4aQ9D3I8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4aQ9D3I8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4aQ9D3I8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4aQ9D3I8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4aQ9D3I8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rhox4aQ9D3I8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rhox4aQ9D3I8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4aQ9D3I8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4aQ9D3I8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4aQ9D3I8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4aQ9D3I8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4aQ9D3I8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4aQ9D3I8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.69■□□□□ 0.42
Rhox4aQ9D3I8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4aQ9D3I8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rhox4aQ9D3I8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4aQ9D3I8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rhox4aQ9D3I8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4aQ9D3I8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4aQ9D3I8 Gm37136-201ENSMUST00000194368 194 ntBASIC17.68■□□□□ 0.42
Rhox4aQ9D3I8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4aQ9D3I8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4aQ9D3I8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.68■□□□□ 0.42
Rhox4aQ9D3I8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4aQ9D3I8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4aQ9D3I8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rhox4aQ9D3I8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.67■□□□□ 0.42
Rhox4aQ9D3I8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4aQ9D3I8 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.67■□□□□ 0.42
Rhox4aQ9D3I8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4aQ9D3I8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4aQ9D3I8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4aQ9D3I8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Rhox4aQ9D3I8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.66■□□□□ 0.42
Rhox4aQ9D3I8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rhox4aQ9D3I8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rhox4aQ9D3I8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rhox4aQ9D3I8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Rhox4aQ9D3I8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rhox4aQ9D3I8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rhox4aQ9D3I8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rhox4aQ9D3I8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms