Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.45■■□□□ 1.02
Trim42Q9D2H5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim42Q9D2H5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.44■■□□□ 1.02
Trim42Q9D2H5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Trim42Q9D2H5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim42Q9D2H5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim42Q9D2H5 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.43■■□□□ 1.02
Trim42Q9D2H5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.43■■□□□ 1.02
Trim42Q9D2H5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim42Q9D2H5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim42Q9D2H5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim42Q9D2H5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim42Q9D2H5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim42Q9D2H5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim42Q9D2H5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim42Q9D2H5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim42Q9D2H5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trim42Q9D2H5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim42Q9D2H5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trim42Q9D2H5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim42Q9D2H5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trim42Q9D2H5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trim42Q9D2H5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim42Q9D2H5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trim42Q9D2H5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.39■■□□□ 1.01
Trim42Q9D2H5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim42Q9D2H5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim42Q9D2H5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
Trim42Q9D2H5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim42Q9D2H5 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.38■■□□□ 1.01
Trim42Q9D2H5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim42Q9D2H5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Trim42Q9D2H5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim42Q9D2H5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim42Q9D2H5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim42Q9D2H5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim42Q9D2H5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim42Q9D2H5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim42Q9D2H5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim42Q9D2H5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim42Q9D2H5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim42Q9D2H5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim42Q9D2H5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim42Q9D2H5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.36■■□□□ 1.01
Trim42Q9D2H5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
Trim42Q9D2H5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim42Q9D2H5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Trim42Q9D2H5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim42Q9D2H5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim42Q9D2H5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim42Q9D2H5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trim42Q9D2H5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.35■■□□□ 1.01
Trim42Q9D2H5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.35■■□□□ 1.01
Trim42Q9D2H5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Trim42Q9D2H5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trim42Q9D2H5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim42Q9D2H5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim42Q9D2H5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim42Q9D2H5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim42Q9D2H5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim42Q9D2H5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim42Q9D2H5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim42Q9D2H5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim42Q9D2H5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
Trim42Q9D2H5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim42Q9D2H5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Trim42Q9D2H5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim42Q9D2H5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.33■■□□□ 1
Trim42Q9D2H5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Trim42Q9D2H5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim42Q9D2H5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.32■■□□□ 1
Trim42Q9D2H5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.32■■□□□ 1
Trim42Q9D2H5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.32■■□□□ 1
Trim42Q9D2H5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim42Q9D2H5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim42Q9D2H5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim42Q9D2H5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.31■■□□□ 1
Trim42Q9D2H5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim42Q9D2H5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.31■■□□□ 1
Trim42Q9D2H5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim42Q9D2H5 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.31■■□□□ 1
Trim42Q9D2H5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim42Q9D2H5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Trim42Q9D2H5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim42Q9D2H5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim42Q9D2H5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim42Q9D2H5 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms