Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Gm12366-201ENSMUST00000121722 873 ntBASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Gm22567-201ENSMUST00000175542 342 ntBASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Gm5786-201ENSMUST00000085368 882 ntBASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Khdc3Q9CWU5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Khdc3Q9CWU5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Khdc3Q9CWU5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.64■□□□□ 0.9
Khdc3Q9CWU5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Khdc3Q9CWU5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.64■□□□□ 0.89
Khdc3Q9CWU5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Khdc3Q9CWU5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Khdc3Q9CWU5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Khdc3Q9CWU5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Khdc3Q9CWU5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc3Q9CWU5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Khdc3Q9CWU5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.61■□□□□ 0.89
Khdc3Q9CWU5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Khdc3Q9CWU5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc3Q9CWU5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc3Q9CWU5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc3Q9CWU5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc3Q9CWU5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc3Q9CWU5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Khdc3Q9CWU5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Khdc3Q9CWU5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Khdc3Q9CWU5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Khdc3Q9CWU5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.59■□□□□ 0.89
Khdc3Q9CWU5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.59■□□□□ 0.89
Khdc3Q9CWU5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Khdc3Q9CWU5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Khdc3Q9CWU5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Khdc3Q9CWU5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Khdc3Q9CWU5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Khdc3Q9CWU5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Khdc3Q9CWU5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Khdc3Q9CWU5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Khdc3Q9CWU5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Khdc3Q9CWU5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Khdc3Q9CWU5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Khdc3Q9CWU5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.58■□□□□ 0.88
Khdc3Q9CWU5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Khdc3Q9CWU5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Khdc3Q9CWU5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Khdc3Q9CWU5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Khdc3Q9CWU5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Khdc3Q9CWU5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Khdc3Q9CWU5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Khdc3Q9CWU5 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.57■□□□□ 0.88
Khdc3Q9CWU5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc3Q9CWU5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc3Q9CWU5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc3Q9CWU5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc3Q9CWU5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc3Q9CWU5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.56■□□□□ 0.88
Khdc3Q9CWU5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc3Q9CWU5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc3Q9CWU5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc3Q9CWU5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc3Q9CWU5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc3Q9CWU5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc3Q9CWU5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc3Q9CWU5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc3Q9CWU5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms