Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Pfdn1Q9CWM4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pfdn1Q9CWM4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pfdn1Q9CWM4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.01■□□□□ 0.63
Pfdn1Q9CWM4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.01■□□□□ 0.63
Pfdn1Q9CWM4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pfdn1Q9CWM4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn1Q9CWM4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn1Q9CWM4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn1Q9CWM4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn1Q9CWM4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn1Q9CWM4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn1Q9CWM4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn1Q9CWM4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn1Q9CWM4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn1Q9CWM4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn1Q9CWM4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn1Q9CWM4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn1Q9CWM4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn1Q9CWM4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.97■□□□□ 0.63
Pfdn1Q9CWM4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn1Q9CWM4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.97■□□□□ 0.63
Pfdn1Q9CWM4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn1Q9CWM4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn1Q9CWM4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pfdn1Q9CWM4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn1Q9CWM4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn1Q9CWM4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn1Q9CWM4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pfdn1Q9CWM4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn1Q9CWM4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn1Q9CWM4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn1Q9CWM4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pfdn1Q9CWM4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn1Q9CWM4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn1Q9CWM4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.94■□□□□ 0.62
Pfdn1Q9CWM4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn1Q9CWM4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn1Q9CWM4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn1Q9CWM4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn1Q9CWM4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn1Q9CWM4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn1Q9CWM4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pfdn1Q9CWM4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.93■□□□□ 0.62
Pfdn1Q9CWM4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn1Q9CWM4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn1Q9CWM4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn1Q9CWM4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn1Q9CWM4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pfdn1Q9CWM4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn1Q9CWM4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn1Q9CWM4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn1Q9CWM4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn1Q9CWM4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn1Q9CWM4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn1Q9CWM4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn1Q9CWM4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn1Q9CWM4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn1Q9CWM4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pfdn1Q9CWM4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn1Q9CWM4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn1Q9CWM4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn1Q9CWM4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn1Q9CWM4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.9■□□□□ 0.62
Pfdn1Q9CWM4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn1Q9CWM4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Pfdn1Q9CWM4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
Pfdn1Q9CWM4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.89■□□□□ 0.61
Pfdn1Q9CWM4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn1Q9CWM4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.89■□□□□ 0.61
Pfdn1Q9CWM4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn1Q9CWM4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pfdn1Q9CWM4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn1Q9CWM4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn1Q9CWM4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.88■□□□□ 0.61
Pfdn1Q9CWM4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pfdn1Q9CWM4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn1Q9CWM4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn1Q9CWM4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.87■□□□□ 0.61
Pfdn1Q9CWM4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn1Q9CWM4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pfdn1Q9CWM4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms