Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cldnd1Q9CQX5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cldnd1Q9CQX5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cldnd1Q9CQX5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.52■■□□□ 1.2
Cldnd1Q9CQX5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Cldnd1Q9CQX5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.52■■□□□ 1.2
Cldnd1Q9CQX5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cldnd1Q9CQX5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cldnd1Q9CQX5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cldnd1Q9CQX5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.51■■□□□ 1.19
Cldnd1Q9CQX5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cldnd1Q9CQX5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.51■■□□□ 1.19
Cldnd1Q9CQX5 Golgb1-201ENSMUST00000023534 498 ntBASIC22.51■■□□□ 1.19
Cldnd1Q9CQX5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cldnd1Q9CQX5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cldnd1Q9CQX5 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.5■■□□□ 1.19
Cldnd1Q9CQX5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.5■■□□□ 1.19
Cldnd1Q9CQX5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.5■■□□□ 1.19
Cldnd1Q9CQX5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Cldnd1Q9CQX5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.49■■□□□ 1.19
Cldnd1Q9CQX5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Cldnd1Q9CQX5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cldnd1Q9CQX5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.49■■□□□ 1.19
Cldnd1Q9CQX5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cldnd1Q9CQX5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cldnd1Q9CQX5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cldnd1Q9CQX5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cldnd1Q9CQX5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.48■■□□□ 1.19
Cldnd1Q9CQX5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cldnd1Q9CQX5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cldnd1Q9CQX5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Cldnd1Q9CQX5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Cldnd1Q9CQX5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cldnd1Q9CQX5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cldnd1Q9CQX5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cldnd1Q9CQX5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.46■■□□□ 1.19
Cldnd1Q9CQX5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.46■■□□□ 1.19
Cldnd1Q9CQX5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.46■■□□□ 1.19
Cldnd1Q9CQX5 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.46■■□□□ 1.19
Cldnd1Q9CQX5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Cldnd1Q9CQX5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cldnd1Q9CQX5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.45■■□□□ 1.19
Cldnd1Q9CQX5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cldnd1Q9CQX5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Cldnd1Q9CQX5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cldnd1Q9CQX5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.45■■□□□ 1.18
Cldnd1Q9CQX5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.45■■□□□ 1.18
Cldnd1Q9CQX5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.45■■□□□ 1.18
Cldnd1Q9CQX5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cldnd1Q9CQX5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
Cldnd1Q9CQX5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cldnd1Q9CQX5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.44■■□□□ 1.18
Cldnd1Q9CQX5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cldnd1Q9CQX5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cldnd1Q9CQX5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cldnd1Q9CQX5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cldnd1Q9CQX5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Cldnd1Q9CQX5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cldnd1Q9CQX5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cldnd1Q9CQX5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.43■■□□□ 1.18
Cldnd1Q9CQX5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cldnd1Q9CQX5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Cldnd1Q9CQX5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Cldnd1Q9CQX5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cldnd1Q9CQX5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cldnd1Q9CQX5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.42■■□□□ 1.18
Cldnd1Q9CQX5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cldnd1Q9CQX5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.42■■□□□ 1.18
Cldnd1Q9CQX5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cldnd1Q9CQX5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cldnd1Q9CQX5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.41■■□□□ 1.18
Cldnd1Q9CQX5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.41■■□□□ 1.18
Cldnd1Q9CQX5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cldnd1Q9CQX5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cldnd1Q9CQX5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Cldnd1Q9CQX5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cldnd1Q9CQX5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cldnd1Q9CQX5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cldnd1Q9CQX5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cldnd1Q9CQX5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cldnd1Q9CQX5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.38■■□□□ 1.17
Cldnd1Q9CQX5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cldnd1Q9CQX5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.38■■□□□ 1.17
Cldnd1Q9CQX5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.38■■□□□ 1.17
Cldnd1Q9CQX5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cldnd1Q9CQX5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cldnd1Q9CQX5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Cldnd1Q9CQX5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cldnd1Q9CQX5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cldnd1Q9CQX5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cldnd1Q9CQX5 Gm8495-201ENSMUST00000188740 694 ntBASIC22.37■■□□□ 1.17
Cldnd1Q9CQX5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cldnd1Q9CQX5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cldnd1Q9CQX5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cldnd1Q9CQX5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cldnd1Q9CQX5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.36■■□□□ 1.17
Cldnd1Q9CQX5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Cldnd1Q9CQX5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Cldnd1Q9CQX5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cldnd1Q9CQX5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms