Protein–RNA interactions for Protein: Q9CQM1

Type III endosome membrane protein TEMP, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQM1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CQM1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CQM1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CQM1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
Q9CQM1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.84■□□□□ 0.93
Q9CQM1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CQM1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CQM1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CQM1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CQM1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CQM1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CQM1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CQM1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Q9CQM1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Q9CQM1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Q9CQM1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CQM1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CQM1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.82■□□□□ 0.92
Q9CQM1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CQM1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CQM1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CQM1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.81■□□□□ 0.92
Q9CQM1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CQM1 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.81■□□□□ 0.92
Q9CQM1 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.8■□□□□ 0.92
Q9CQM1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CQM1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.8■□□□□ 0.92
Q9CQM1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CQM1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CQM1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.8■□□□□ 0.92
Q9CQM1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Q9CQM1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CQM1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CQM1 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.8■□□□□ 0.92
Q9CQM1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.79■□□□□ 0.92
Q9CQM1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CQM1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CQM1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.79■□□□□ 0.92
Q9CQM1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.79■□□□□ 0.92
Q9CQM1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CQM1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CQM1 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.79■□□□□ 0.92
Q9CQM1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Q9CQM1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Q9CQM1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q9CQM1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q9CQM1 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.78■□□□□ 0.92
Q9CQM1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CQM1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CQM1 Amer2-203ENSMUST00000225247 2662 ntBASIC20.77■□□□□ 0.92
Q9CQM1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CQM1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Q9CQM1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.77■□□□□ 0.92
Q9CQM1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CQM1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CQM1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CQM1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CQM1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CQM1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.75■□□□□ 0.91
Q9CQM1 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.75■□□□□ 0.91
Q9CQM1 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.75■□□□□ 0.91
Q9CQM1 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.75■□□□□ 0.91
Q9CQM1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CQM1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CQM1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQM1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQM1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
Q9CQM1 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.74■□□□□ 0.91
Q9CQM1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQM1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Q9CQM1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQM1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQM1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQM1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQM1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQM1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQM1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.72■□□□□ 0.91
Q9CQM1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQM1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.72■□□□□ 0.91
Q9CQM1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQM1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Q9CQM1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQM1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQM1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQM1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQM1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Q9CQM1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.71■□□□□ 0.91
Q9CQM1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQM1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQM1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQM1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Q9CQM1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Q9CQM1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Q9CQM1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQM1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Q9CQM1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQM1 Gm6139-201ENSMUST00000079261 882 ntBASIC20.7■□□□□ 0.9
Q9CQM1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.7■□□□□ 0.9
Q9CQM1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQM1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms