Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Chchd1Q9CQA6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chchd1Q9CQA6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chchd1Q9CQA6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chchd1Q9CQA6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chchd1Q9CQA6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chchd1Q9CQA6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chchd1Q9CQA6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Chchd1Q9CQA6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chchd1Q9CQA6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chchd1Q9CQA6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chchd1Q9CQA6 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.39■□□□□ 0.22
Chchd1Q9CQA6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chchd1Q9CQA6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.39■□□□□ 0.21
Chchd1Q9CQA6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chchd1Q9CQA6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chchd1Q9CQA6 Gm27322-201ENSMUST00000184007 104 ntBASIC16.39■□□□□ 0.21
Chchd1Q9CQA6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chchd1Q9CQA6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Chchd1Q9CQA6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chchd1Q9CQA6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chchd1Q9CQA6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chchd1Q9CQA6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chchd1Q9CQA6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chchd1Q9CQA6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chchd1Q9CQA6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chchd1Q9CQA6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chchd1Q9CQA6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chchd1Q9CQA6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chchd1Q9CQA6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chchd1Q9CQA6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Chchd1Q9CQA6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chchd1Q9CQA6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.36■□□□□ 0.21
Chchd1Q9CQA6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chchd1Q9CQA6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chchd1Q9CQA6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Chchd1Q9CQA6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chchd1Q9CQA6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.36■□□□□ 0.21
Chchd1Q9CQA6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chchd1Q9CQA6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chchd1Q9CQA6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chchd1Q9CQA6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chchd1Q9CQA6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Chchd1Q9CQA6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chchd1Q9CQA6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Chchd1Q9CQA6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chchd1Q9CQA6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Chchd1Q9CQA6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Chchd1Q9CQA6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chchd1Q9CQA6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chchd1Q9CQA6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chchd1Q9CQA6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Chchd1Q9CQA6 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.32■□□□□ 0.2
Chchd1Q9CQA6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chchd1Q9CQA6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chchd1Q9CQA6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chchd1Q9CQA6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Chchd1Q9CQA6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chchd1Q9CQA6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chchd1Q9CQA6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chchd1Q9CQA6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chchd1Q9CQA6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.31■□□□□ 0.2
Chchd1Q9CQA6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chchd1Q9CQA6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chchd1Q9CQA6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chchd1Q9CQA6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chchd1Q9CQA6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chchd1Q9CQA6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chchd1Q9CQA6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms