Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx6-1Q99MA9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Nkx6-1Q99MA9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx6-1Q99MA9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx6-1Q99MA9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx6-1Q99MA9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx6-1Q99MA9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx6-1Q99MA9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx6-1Q99MA9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx6-1Q99MA9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx6-1Q99MA9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.38■□□□□ 0.85
Nkx6-1Q99MA9 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.38■□□□□ 0.85
Nkx6-1Q99MA9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx6-1Q99MA9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx6-1Q99MA9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nkx6-1Q99MA9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nkx6-1Q99MA9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx6-1Q99MA9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.37■□□□□ 0.85
Nkx6-1Q99MA9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx6-1Q99MA9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx6-1Q99MA9 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.36■□□□□ 0.85
Nkx6-1Q99MA9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx6-1Q99MA9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.36■□□□□ 0.85
Nkx6-1Q99MA9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.36■□□□□ 0.85
Nkx6-1Q99MA9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx6-1Q99MA9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx6-1Q99MA9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Nkx6-1Q99MA9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx6-1Q99MA9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx6-1Q99MA9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx6-1Q99MA9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx6-1Q99MA9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx6-1Q99MA9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx6-1Q99MA9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx6-1Q99MA9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
Nkx6-1Q99MA9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx6-1Q99MA9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx6-1Q99MA9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx6-1Q99MA9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx6-1Q99MA9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx6-1Q99MA9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nkx6-1Q99MA9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.33■□□□□ 0.85
Nkx6-1Q99MA9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx6-1Q99MA9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx6-1Q99MA9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.33■□□□□ 0.84
Nkx6-1Q99MA9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx6-1Q99MA9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx6-1Q99MA9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx6-1Q99MA9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx6-1Q99MA9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.32■□□□□ 0.84
Nkx6-1Q99MA9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.32■□□□□ 0.84
Nkx6-1Q99MA9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx6-1Q99MA9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx6-1Q99MA9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.31■□□□□ 0.84
Nkx6-1Q99MA9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx6-1Q99MA9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.31■□□□□ 0.84
Nkx6-1Q99MA9 Golgb1-201ENSMUST00000023534 498 ntBASIC20.31■□□□□ 0.84
Nkx6-1Q99MA9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nkx6-1Q99MA9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx6-1Q99MA9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx6-1Q99MA9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
Nkx6-1Q99MA9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.3■□□□□ 0.84
Nkx6-1Q99MA9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx6-1Q99MA9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx6-1Q99MA9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx6-1Q99MA9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx6-1Q99MA9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx6-1Q99MA9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx6-1Q99MA9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Nkx6-1Q99MA9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx6-1Q99MA9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nkx6-1Q99MA9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx6-1Q99MA9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx6-1Q99MA9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx6-1Q99MA9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.28■□□□□ 0.84
Nkx6-1Q99MA9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Nkx6-1Q99MA9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx6-1Q99MA9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.27■□□□□ 0.84
Nkx6-1Q99MA9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.27■□□□□ 0.84
Nkx6-1Q99MA9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.27■□□□□ 0.84
Nkx6-1Q99MA9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx6-1Q99MA9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx6-1Q99MA9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx6-1Q99MA9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nkx6-1Q99MA9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Nkx6-1Q99MA9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-1Q99MA9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.26■□□□□ 0.83
Nkx6-1Q99MA9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-1Q99MA9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nkx6-1Q99MA9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nkx6-1Q99MA9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-1Q99MA9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms