Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Homer3Q99JP6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Homer3Q99JP6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.49■■□□□ 1.03
Homer3Q99JP6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Homer3Q99JP6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Homer3Q99JP6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Homer3Q99JP6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Homer3Q99JP6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Homer3Q99JP6 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.48■■□□□ 1.03
Homer3Q99JP6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Homer3Q99JP6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Homer3Q99JP6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Homer3Q99JP6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.48■■□□□ 1.03
Homer3Q99JP6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.47■■□□□ 1.03
Homer3Q99JP6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Homer3Q99JP6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Homer3Q99JP6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Homer3Q99JP6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Homer3Q99JP6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Homer3Q99JP6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Homer3Q99JP6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Homer3Q99JP6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Homer3Q99JP6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Homer3Q99JP6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Homer3Q99JP6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Homer3Q99JP6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Homer3Q99JP6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.46■■□□□ 1.03
Homer3Q99JP6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Homer3Q99JP6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Homer3Q99JP6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.45■■□□□ 1.02
Homer3Q99JP6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Homer3Q99JP6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Homer3Q99JP6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Homer3Q99JP6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Homer3Q99JP6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Homer3Q99JP6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.44■■□□□ 1.02
Homer3Q99JP6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Homer3Q99JP6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Homer3Q99JP6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Homer3Q99JP6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Homer3Q99JP6 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.43■■□□□ 1.02
Homer3Q99JP6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Homer3Q99JP6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Homer3Q99JP6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Homer3Q99JP6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Homer3Q99JP6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Homer3Q99JP6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.42■■□□□ 1.02
Homer3Q99JP6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Homer3Q99JP6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Homer3Q99JP6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Homer3Q99JP6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Homer3Q99JP6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Homer3Q99JP6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Homer3Q99JP6 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.41■■□□□ 1.02
Homer3Q99JP6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Homer3Q99JP6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Homer3Q99JP6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Homer3Q99JP6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Homer3Q99JP6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Homer3Q99JP6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Homer3Q99JP6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Homer3Q99JP6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Homer3Q99JP6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Homer3Q99JP6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Homer3Q99JP6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
Homer3Q99JP6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Homer3Q99JP6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.39■■□□□ 1.02
Homer3Q99JP6 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.39■■□□□ 1.02
Homer3Q99JP6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Homer3Q99JP6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Homer3Q99JP6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Homer3Q99JP6 Gm7432-201ENSMUST00000210343 879 ntBASIC21.39■■□□□ 1.01
Homer3Q99JP6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Homer3Q99JP6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Homer3Q99JP6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Homer3Q99JP6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Homer3Q99JP6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.38■■□□□ 1.01
Homer3Q99JP6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Homer3Q99JP6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Homer3Q99JP6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Homer3Q99JP6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Homer3Q99JP6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Homer3Q99JP6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Homer3Q99JP6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Homer3Q99JP6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Homer3Q99JP6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Homer3Q99JP6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Homer3Q99JP6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Homer3Q99JP6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.37■■□□□ 1.01
Homer3Q99JP6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Homer3Q99JP6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Homer3Q99JP6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Homer3Q99JP6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Homer3Q99JP6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Homer3Q99JP6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Homer3Q99JP6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Homer3Q99JP6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Homer3Q99JP6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Homer3Q99JP6 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.35■■□□□ 1.01
Homer3Q99JP6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms