Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trex1Q91XB0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trex1Q91XB0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trex1Q91XB0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.09■■□□□ 1.61
Trex1Q91XB0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.09■■□□□ 1.61
Trex1Q91XB0 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.08■■□□□ 1.61
Trex1Q91XB0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.08■■□□□ 1.61
Trex1Q91XB0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.08■■□□□ 1.61
Trex1Q91XB0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Trex1Q91XB0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Trex1Q91XB0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Trex1Q91XB0 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.07■■□□□ 1.6
Trex1Q91XB0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trex1Q91XB0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trex1Q91XB0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
Trex1Q91XB0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Trex1Q91XB0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trex1Q91XB0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trex1Q91XB0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.06■■□□□ 1.6
Trex1Q91XB0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trex1Q91XB0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Trex1Q91XB0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.06■■□□□ 1.6
Trex1Q91XB0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.06■■□□□ 1.6
Trex1Q91XB0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trex1Q91XB0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trex1Q91XB0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trex1Q91XB0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Trex1Q91XB0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trex1Q91XB0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Trex1Q91XB0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Trex1Q91XB0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trex1Q91XB0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trex1Q91XB0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trex1Q91XB0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Trex1Q91XB0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trex1Q91XB0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.04■■□□□ 1.6
Trex1Q91XB0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trex1Q91XB0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trex1Q91XB0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trex1Q91XB0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trex1Q91XB0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trex1Q91XB0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.03■■□□□ 1.6
Trex1Q91XB0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.03■■□□□ 1.6
Trex1Q91XB0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trex1Q91XB0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Trex1Q91XB0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.02■■□□□ 1.6
Trex1Q91XB0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trex1Q91XB0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trex1Q91XB0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.02■■□□□ 1.6
Trex1Q91XB0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.02■■□□□ 1.6
Trex1Q91XB0 Gm40881-201ENSMUST00000223397 166 ntBASIC25.02■■□□□ 1.6
Trex1Q91XB0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Trex1Q91XB0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trex1Q91XB0 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.01■■□□□ 1.59
Trex1Q91XB0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Trex1Q91XB0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Trex1Q91XB0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trex1Q91XB0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trex1Q91XB0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25■■□□□ 1.59
Trex1Q91XB0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25■■□□□ 1.59
Trex1Q91XB0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trex1Q91XB0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trex1Q91XB0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trex1Q91XB0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.99■■□□□ 1.59
Trex1Q91XB0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trex1Q91XB0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trex1Q91XB0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trex1Q91XB0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Trex1Q91XB0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trex1Q91XB0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trex1Q91XB0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Trex1Q91XB0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.98■■□□□ 1.59
Trex1Q91XB0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trex1Q91XB0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trex1Q91XB0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.97■■□□□ 1.59
Trex1Q91XB0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trex1Q91XB0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Trex1Q91XB0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trex1Q91XB0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.96■■□□□ 1.59
Trex1Q91XB0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Trex1Q91XB0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Trex1Q91XB0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.95■■□□□ 1.59
Trex1Q91XB0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trex1Q91XB0 Gm22238-201ENSMUST00000175222 88 ntBASIC24.95■■□□□ 1.58
Trex1Q91XB0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Trex1Q91XB0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trex1Q91XB0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trex1Q91XB0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trex1Q91XB0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trex1Q91XB0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Trex1Q91XB0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trex1Q91XB0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trex1Q91XB0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.93■■□□□ 1.58
Trex1Q91XB0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trex1Q91XB0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trex1Q91XB0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Trex1Q91XB0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trex1Q91XB0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Trex1Q91XB0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trex1Q91XB0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms