Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdhr1Q8VHP6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Cdhr1Q8VHP6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Cdhr1Q8VHP6 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.1■□□□□ 0.97
Cdhr1Q8VHP6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdhr1Q8VHP6 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.1■□□□□ 0.97
Cdhr1Q8VHP6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdhr1Q8VHP6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.1■□□□□ 0.97
Cdhr1Q8VHP6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.1■□□□□ 0.97
Cdhr1Q8VHP6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdhr1Q8VHP6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdhr1Q8VHP6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdhr1Q8VHP6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdhr1Q8VHP6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.09■□□□□ 0.97
Cdhr1Q8VHP6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdhr1Q8VHP6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdhr1Q8VHP6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdhr1Q8VHP6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdhr1Q8VHP6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.08■□□□□ 0.96
Cdhr1Q8VHP6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cdhr1Q8VHP6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cdhr1Q8VHP6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdhr1Q8VHP6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdhr1Q8VHP6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdhr1Q8VHP6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.07■□□□□ 0.96
Cdhr1Q8VHP6 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.07■□□□□ 0.96
Cdhr1Q8VHP6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.07■□□□□ 0.96
Cdhr1Q8VHP6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdhr1Q8VHP6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdhr1Q8VHP6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdhr1Q8VHP6 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.06■□□□□ 0.96
Cdhr1Q8VHP6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.06■□□□□ 0.96
Cdhr1Q8VHP6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdhr1Q8VHP6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdhr1Q8VHP6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.05■□□□□ 0.96
Cdhr1Q8VHP6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdhr1Q8VHP6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdhr1Q8VHP6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdhr1Q8VHP6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.04■□□□□ 0.96
Cdhr1Q8VHP6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.04■□□□□ 0.96
Cdhr1Q8VHP6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdhr1Q8VHP6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdhr1Q8VHP6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdhr1Q8VHP6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cdhr1Q8VHP6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdhr1Q8VHP6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdhr1Q8VHP6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdhr1Q8VHP6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.03■□□□□ 0.96
Cdhr1Q8VHP6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.03■□□□□ 0.96
Cdhr1Q8VHP6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.03■□□□□ 0.96
Cdhr1Q8VHP6 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.03■□□□□ 0.96
Cdhr1Q8VHP6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdhr1Q8VHP6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdhr1Q8VHP6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cdhr1Q8VHP6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdhr1Q8VHP6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdhr1Q8VHP6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdhr1Q8VHP6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdhr1Q8VHP6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdhr1Q8VHP6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21■□□□□ 0.95
Cdhr1Q8VHP6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdhr1Q8VHP6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdhr1Q8VHP6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.99■□□□□ 0.95
Cdhr1Q8VHP6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdhr1Q8VHP6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdhr1Q8VHP6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cdhr1Q8VHP6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdhr1Q8VHP6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdhr1Q8VHP6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdhr1Q8VHP6 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.98■□□□□ 0.95
Cdhr1Q8VHP6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cdhr1Q8VHP6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.98■□□□□ 0.95
Cdhr1Q8VHP6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.98■□□□□ 0.95
Cdhr1Q8VHP6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Cdhr1Q8VHP6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdhr1Q8VHP6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdhr1Q8VHP6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdhr1Q8VHP6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdhr1Q8VHP6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdhr1Q8VHP6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.97■□□□□ 0.95
Cdhr1Q8VHP6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.97■□□□□ 0.95
Cdhr1Q8VHP6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.97■□□□□ 0.95
Cdhr1Q8VHP6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.97■□□□□ 0.95
Cdhr1Q8VHP6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdhr1Q8VHP6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdhr1Q8VHP6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdhr1Q8VHP6 Gm7417-201ENSMUST00000192950 473 ntBASIC20.96■□□□□ 0.95
Cdhr1Q8VHP6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdhr1Q8VHP6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdhr1Q8VHP6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdhr1Q8VHP6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdhr1Q8VHP6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdhr1Q8VHP6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cdhr1Q8VHP6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdhr1Q8VHP6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdhr1Q8VHP6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdhr1Q8VHP6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdhr1Q8VHP6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cdhr1Q8VHP6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cdhr1Q8VHP6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms