Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ndc1Q8VCB1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ndc1Q8VCB1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ndc1Q8VCB1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ndc1Q8VCB1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ndc1Q8VCB1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.31■□□□□ 0.84
Ndc1Q8VCB1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ndc1Q8VCB1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.31■□□□□ 0.84
Ndc1Q8VCB1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ndc1Q8VCB1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ndc1Q8VCB1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ndc1Q8VCB1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ndc1Q8VCB1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ndc1Q8VCB1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ndc1Q8VCB1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ndc1Q8VCB1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ndc1Q8VCB1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ndc1Q8VCB1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ndc1Q8VCB1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ndc1Q8VCB1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.29■□□□□ 0.84
Ndc1Q8VCB1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ndc1Q8VCB1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ndc1Q8VCB1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ndc1Q8VCB1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ndc1Q8VCB1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc1Q8VCB1 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.28■□□□□ 0.84
Ndc1Q8VCB1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.28■□□□□ 0.84
Ndc1Q8VCB1 Rps24-207ENSMUST00000224568 714 ntBASIC20.28■□□□□ 0.84
Ndc1Q8VCB1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ndc1Q8VCB1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ndc1Q8VCB1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc1Q8VCB1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc1Q8VCB1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ndc1Q8VCB1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc1Q8VCB1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc1Q8VCB1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ndc1Q8VCB1 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.27■□□□□ 0.84
Ndc1Q8VCB1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc1Q8VCB1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ndc1Q8VCB1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ndc1Q8VCB1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc1Q8VCB1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ndc1Q8VCB1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc1Q8VCB1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc1Q8VCB1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc1Q8VCB1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc1Q8VCB1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc1Q8VCB1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.25■□□□□ 0.83
Ndc1Q8VCB1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc1Q8VCB1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ndc1Q8VCB1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc1Q8VCB1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ndc1Q8VCB1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc1Q8VCB1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc1Q8VCB1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc1Q8VCB1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ndc1Q8VCB1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 Gm10232-201ENSMUST00000089221 720 ntBASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc1Q8VCB1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ndc1Q8VCB1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc1Q8VCB1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc1Q8VCB1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.22■□□□□ 0.83
Ndc1Q8VCB1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc1Q8VCB1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc1Q8VCB1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc1Q8VCB1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc1Q8VCB1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc1Q8VCB1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.2■□□□□ 0.82
Ndc1Q8VCB1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ndc1Q8VCB1 Gm14117-201ENSMUST00000122417 843 ntBASIC20.2■□□□□ 0.82
Ndc1Q8VCB1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndc1Q8VCB1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 Gm45102-201ENSMUST00000207427 857 ntBASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.19■□□□□ 0.82
Ndc1Q8VCB1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms