Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cuedc1Q8R3V6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cuedc1Q8R3V6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cuedc1Q8R3V6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Cuedc1Q8R3V6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cuedc1Q8R3V6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cuedc1Q8R3V6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cuedc1Q8R3V6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cuedc1Q8R3V6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cuedc1Q8R3V6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cuedc1Q8R3V6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cuedc1Q8R3V6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cuedc1Q8R3V6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cuedc1Q8R3V6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cuedc1Q8R3V6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cuedc1Q8R3V6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cuedc1Q8R3V6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cuedc1Q8R3V6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cuedc1Q8R3V6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cuedc1Q8R3V6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cuedc1Q8R3V6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.41■□□□□ 0.7
Cuedc1Q8R3V6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cuedc1Q8R3V6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.41■□□□□ 0.7
Cuedc1Q8R3V6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cuedc1Q8R3V6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Cuedc1Q8R3V6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cuedc1Q8R3V6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cuedc1Q8R3V6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.4■□□□□ 0.7
Cuedc1Q8R3V6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cuedc1Q8R3V6 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.4■□□□□ 0.7
Cuedc1Q8R3V6 Gm13241-201ENSMUST00000094493 780 ntBASIC19.4■□□□□ 0.7
Cuedc1Q8R3V6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cuedc1Q8R3V6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.39■□□□□ 0.7
Cuedc1Q8R3V6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cuedc1Q8R3V6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cuedc1Q8R3V6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cuedc1Q8R3V6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cuedc1Q8R3V6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cuedc1Q8R3V6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cuedc1Q8R3V6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cuedc1Q8R3V6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cuedc1Q8R3V6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Cuedc1Q8R3V6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cuedc1Q8R3V6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cuedc1Q8R3V6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cuedc1Q8R3V6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.38■□□□□ 0.69
Cuedc1Q8R3V6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.38■□□□□ 0.69
Cuedc1Q8R3V6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cuedc1Q8R3V6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cuedc1Q8R3V6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cuedc1Q8R3V6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cuedc1Q8R3V6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cuedc1Q8R3V6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cuedc1Q8R3V6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cuedc1Q8R3V6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cuedc1Q8R3V6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cuedc1Q8R3V6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cuedc1Q8R3V6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cuedc1Q8R3V6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cuedc1Q8R3V6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cuedc1Q8R3V6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cuedc1Q8R3V6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cuedc1Q8R3V6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cuedc1Q8R3V6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cuedc1Q8R3V6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.34■□□□□ 0.69
Cuedc1Q8R3V6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.34■□□□□ 0.69
Cuedc1Q8R3V6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Cuedc1Q8R3V6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cuedc1Q8R3V6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cuedc1Q8R3V6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cuedc1Q8R3V6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cuedc1Q8R3V6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cuedc1Q8R3V6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cuedc1Q8R3V6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 Gm7417-201ENSMUST00000192950 473 ntBASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cuedc1Q8R3V6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cuedc1Q8R3V6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cuedc1Q8R3V6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cuedc1Q8R3V6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cuedc1Q8R3V6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cuedc1Q8R3V6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms