Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf113a1Q8R3P8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf113a1Q8R3P8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf113a1Q8R3P8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf113a1Q8R3P8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf113a1Q8R3P8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf113a1Q8R3P8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf113a1Q8R3P8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Rnf113a1Q8R3P8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf113a1Q8R3P8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rnf113a1Q8R3P8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf113a1Q8R3P8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rnf113a1Q8R3P8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf113a1Q8R3P8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rnf113a1Q8R3P8 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.83■□□□□ 0.61
Rnf113a1Q8R3P8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf113a1Q8R3P8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf113a1Q8R3P8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf113a1Q8R3P8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.83■□□□□ 0.6
Rnf113a1Q8R3P8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Rnf113a1Q8R3P8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf113a1Q8R3P8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf113a1Q8R3P8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf113a1Q8R3P8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf113a1Q8R3P8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.8■□□□□ 0.6
Rnf113a1Q8R3P8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf113a1Q8R3P8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf113a1Q8R3P8 Gm5921-201ENSMUST00000075898 882 ntBASIC18.8■□□□□ 0.6
Rnf113a1Q8R3P8 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.8■□□□□ 0.6
Rnf113a1Q8R3P8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf113a1Q8R3P8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf113a1Q8R3P8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf113a1Q8R3P8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf113a1Q8R3P8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf113a1Q8R3P8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf113a1Q8R3P8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf113a1Q8R3P8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf113a1Q8R3P8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf113a1Q8R3P8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf113a1Q8R3P8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Rnf113a1Q8R3P8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.78■□□□□ 0.6
Rnf113a1Q8R3P8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf113a1Q8R3P8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf113a1Q8R3P8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf113a1Q8R3P8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rnf113a1Q8R3P8 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.77■□□□□ 0.59
Rnf113a1Q8R3P8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.77■□□□□ 0.59
Rnf113a1Q8R3P8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf113a1Q8R3P8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf113a1Q8R3P8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf113a1Q8R3P8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rnf113a1Q8R3P8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf113a1Q8R3P8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rnf113a1Q8R3P8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.75■□□□□ 0.59
Rnf113a1Q8R3P8 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.75■□□□□ 0.59
Rnf113a1Q8R3P8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf113a1Q8R3P8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf113a1Q8R3P8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf113a1Q8R3P8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf113a1Q8R3P8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf113a1Q8R3P8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf113a1Q8R3P8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rnf113a1Q8R3P8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
Rnf113a1Q8R3P8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf113a1Q8R3P8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf113a1Q8R3P8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf113a1Q8R3P8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rnf113a1Q8R3P8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rnf113a1Q8R3P8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf113a1Q8R3P8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Rnf113a1Q8R3P8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf113a1Q8R3P8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms