Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc59Q8R2N0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc59Q8R2N0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ccdc59Q8R2N0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc59Q8R2N0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc59Q8R2N0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc59Q8R2N0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc59Q8R2N0 Mir3960-201ENSMUST00000198213 73 ntBASIC20.28■□□□□ 0.84
Ccdc59Q8R2N0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc59Q8R2N0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc59Q8R2N0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.27■□□□□ 0.84
Ccdc59Q8R2N0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc59Q8R2N0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc59Q8R2N0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc59Q8R2N0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc59Q8R2N0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc59Q8R2N0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccdc59Q8R2N0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc59Q8R2N0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc59Q8R2N0 Gm11175-201ENSMUST00000116172 543 ntBASIC20.25■□□□□ 0.83
Ccdc59Q8R2N0 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.25■□□□□ 0.83
Ccdc59Q8R2N0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Ccdc59Q8R2N0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc59Q8R2N0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
Ccdc59Q8R2N0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc59Q8R2N0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc59Q8R2N0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.23■□□□□ 0.83
Ccdc59Q8R2N0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc59Q8R2N0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc59Q8R2N0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc59Q8R2N0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc59Q8R2N0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc59Q8R2N0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc59Q8R2N0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc59Q8R2N0 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.22■□□□□ 0.83
Ccdc59Q8R2N0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc59Q8R2N0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc59Q8R2N0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc59Q8R2N0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc59Q8R2N0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc59Q8R2N0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc59Q8R2N0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc59Q8R2N0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc59Q8R2N0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc59Q8R2N0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc59Q8R2N0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc59Q8R2N0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc59Q8R2N0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc59Q8R2N0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc59Q8R2N0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc59Q8R2N0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc59Q8R2N0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc59Q8R2N0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Ccdc59Q8R2N0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc59Q8R2N0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc59Q8R2N0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Gm11687-201ENSMUST00000118911 886 ntBASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc59Q8R2N0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Gm9806-201ENSMUST00000051080 552 ntBASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc59Q8R2N0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ccdc59Q8R2N0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc59Q8R2N0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc59Q8R2N0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc59Q8R2N0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ccdc59Q8R2N0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms