Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim31Q8R0K2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim31Q8R0K2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.98■□□□□ 0.95
Trim31Q8R0K2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim31Q8R0K2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim31Q8R0K2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim31Q8R0K2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim31Q8R0K2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim31Q8R0K2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim31Q8R0K2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim31Q8R0K2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Trim31Q8R0K2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim31Q8R0K2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim31Q8R0K2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim31Q8R0K2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim31Q8R0K2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim31Q8R0K2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim31Q8R0K2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim31Q8R0K2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim31Q8R0K2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim31Q8R0K2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim31Q8R0K2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim31Q8R0K2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim31Q8R0K2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim31Q8R0K2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim31Q8R0K2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim31Q8R0K2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim31Q8R0K2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim31Q8R0K2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trim31Q8R0K2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim31Q8R0K2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim31Q8R0K2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.94■□□□□ 0.94
Trim31Q8R0K2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim31Q8R0K2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim31Q8R0K2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim31Q8R0K2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim31Q8R0K2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim31Q8R0K2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim31Q8R0K2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.93■□□□□ 0.94
Trim31Q8R0K2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim31Q8R0K2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim31Q8R0K2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim31Q8R0K2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim31Q8R0K2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim31Q8R0K2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim31Q8R0K2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim31Q8R0K2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim31Q8R0K2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim31Q8R0K2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim31Q8R0K2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim31Q8R0K2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim31Q8R0K2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim31Q8R0K2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim31Q8R0K2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim31Q8R0K2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim31Q8R0K2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim31Q8R0K2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim31Q8R0K2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim31Q8R0K2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim31Q8R0K2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim31Q8R0K2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.86■□□□□ 0.93
Trim31Q8R0K2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim31Q8R0K2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Trim31Q8R0K2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim31Q8R0K2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim31Q8R0K2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim31Q8R0K2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim31Q8R0K2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim31Q8R0K2 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.85■□□□□ 0.93
Trim31Q8R0K2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim31Q8R0K2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim31Q8R0K2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms