Protein–RNA interactions for Protein: Q8K212

Pacs1, Phosphofurin acidic cluster sorting protein 1, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacs1Q8K212 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.76■■□□□ 1.07
Pacs1Q8K212 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pacs1Q8K212 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pacs1Q8K212 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pacs1Q8K212 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pacs1Q8K212 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pacs1Q8K212 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Pacs1Q8K212 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pacs1Q8K212 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pacs1Q8K212 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pacs1Q8K212 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pacs1Q8K212 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pacs1Q8K212 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.75■■□□□ 1.07
Pacs1Q8K212 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.75■■□□□ 1.07
Pacs1Q8K212 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pacs1Q8K212 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pacs1Q8K212 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pacs1Q8K212 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pacs1Q8K212 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.74■■□□□ 1.07
Pacs1Q8K212 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pacs1Q8K212 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.74■■□□□ 1.07
Pacs1Q8K212 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pacs1Q8K212 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pacs1Q8K212 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pacs1Q8K212 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Gm27502-201ENSMUST00000183495 199 ntBASIC21.73■■□□□ 1.07
Pacs1Q8K212 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pacs1Q8K212 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pacs1Q8K212 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pacs1Q8K212 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pacs1Q8K212 Gm14523-201ENSMUST00000117260 558 ntBASIC21.72■■□□□ 1.07
Pacs1Q8K212 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.72■■□□□ 1.07
Pacs1Q8K212 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.72■■□□□ 1.07
Pacs1Q8K212 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pacs1Q8K212 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pacs1Q8K212 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pacs1Q8K212 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Pacs1Q8K212 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pacs1Q8K212 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pacs1Q8K212 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pacs1Q8K212 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pacs1Q8K212 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pacs1Q8K212 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Pacs1Q8K212 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.7■■□□□ 1.06
Pacs1Q8K212 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pacs1Q8K212 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pacs1Q8K212 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
Pacs1Q8K212 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pacs1Q8K212 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pacs1Q8K212 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pacs1Q8K212 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pacs1Q8K212 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pacs1Q8K212 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pacs1Q8K212 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pacs1Q8K212 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pacs1Q8K212 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.68■■□□□ 1.06
Pacs1Q8K212 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pacs1Q8K212 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.68■■□□□ 1.06
Pacs1Q8K212 Gm12366-201ENSMUST00000121722 873 ntBASIC21.68■■□□□ 1.06
Pacs1Q8K212 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.68■■□□□ 1.06
Pacs1Q8K212 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.68■■□□□ 1.06
Pacs1Q8K212 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.68■■□□□ 1.06
Pacs1Q8K212 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.68■■□□□ 1.06
Pacs1Q8K212 Gm5786-201ENSMUST00000085368 882 ntBASIC21.68■■□□□ 1.06
Pacs1Q8K212 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pacs1Q8K212 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pacs1Q8K212 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pacs1Q8K212 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pacs1Q8K212 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.67■■□□□ 1.06
Pacs1Q8K212 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.67■■□□□ 1.06
Pacs1Q8K212 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pacs1Q8K212 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pacs1Q8K212 Gm7332-201ENSMUST00000118351 454 ntBASIC21.67■■□□□ 1.06
Pacs1Q8K212 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pacs1Q8K212 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pacs1Q8K212 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.66■■□□□ 1.06
Pacs1Q8K212 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pacs1Q8K212 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pacs1Q8K212 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pacs1Q8K212 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pacs1Q8K212 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.66■■□□□ 1.06
Pacs1Q8K212 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pacs1Q8K212 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.65■■□□□ 1.06
Pacs1Q8K212 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pacs1Q8K212 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pacs1Q8K212 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Pacs1Q8K212 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pacs1Q8K212 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pacs1Q8K212 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Pacs1Q8K212 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pacs1Q8K212 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.64■■□□□ 1.05
Pacs1Q8K212 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms