Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn4rl1Q8K0S5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.28■■□□□ 1.16
Rtn4rl1Q8K0S5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn4rl1Q8K0S5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Rtn4rl1Q8K0S5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn4rl1Q8K0S5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn4rl1Q8K0S5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn4rl1Q8K0S5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.27■■□□□ 1.16
Rtn4rl1Q8K0S5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn4rl1Q8K0S5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn4rl1Q8K0S5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
Rtn4rl1Q8K0S5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn4rl1Q8K0S5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn4rl1Q8K0S5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn4rl1Q8K0S5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn4rl1Q8K0S5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.26■■□□□ 1.15
Rtn4rl1Q8K0S5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn4rl1Q8K0S5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.25■■□□□ 1.15
Rtn4rl1Q8K0S5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn4rl1Q8K0S5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rtn4rl1Q8K0S5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn4rl1Q8K0S5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn4rl1Q8K0S5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn4rl1Q8K0S5 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.24■■□□□ 1.15
Rtn4rl1Q8K0S5 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.24■■□□□ 1.15
Rtn4rl1Q8K0S5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn4rl1Q8K0S5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn4rl1Q8K0S5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
Rtn4rl1Q8K0S5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Rtn4rl1Q8K0S5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn4rl1Q8K0S5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn4rl1Q8K0S5 Gm10399-202ENSMUST00000202768 748 ntBASIC22.23■■□□□ 1.15
Rtn4rl1Q8K0S5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.23■■□□□ 1.15
Rtn4rl1Q8K0S5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn4rl1Q8K0S5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn4rl1Q8K0S5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Rtn4rl1Q8K0S5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn4rl1Q8K0S5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn4rl1Q8K0S5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn4rl1Q8K0S5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Rtn4rl1Q8K0S5 Gm12922-201ENSMUST00000120626 809 ntBASIC22.21■■□□□ 1.15
Rtn4rl1Q8K0S5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn4rl1Q8K0S5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.21■■□□□ 1.15
Rtn4rl1Q8K0S5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn4rl1Q8K0S5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn4rl1Q8K0S5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn4rl1Q8K0S5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn4rl1Q8K0S5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn4rl1Q8K0S5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn4rl1Q8K0S5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn4rl1Q8K0S5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn4rl1Q8K0S5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn4rl1Q8K0S5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn4rl1Q8K0S5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn4rl1Q8K0S5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Rtn4rl1Q8K0S5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn4rl1Q8K0S5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.18■■□□□ 1.14
Rtn4rl1Q8K0S5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn4rl1Q8K0S5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.18■■□□□ 1.14
Rtn4rl1Q8K0S5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.18■■□□□ 1.14
Rtn4rl1Q8K0S5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn4rl1Q8K0S5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn4rl1Q8K0S5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn4rl1Q8K0S5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtn4rl1Q8K0S5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn4rl1Q8K0S5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Rtn4rl1Q8K0S5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rtn4rl1Q8K0S5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn4rl1Q8K0S5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn4rl1Q8K0S5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.16■■□□□ 1.14
Rtn4rl1Q8K0S5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn4rl1Q8K0S5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn4rl1Q8K0S5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.16■■□□□ 1.14
Rtn4rl1Q8K0S5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn4rl1Q8K0S5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn4rl1Q8K0S5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn4rl1Q8K0S5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn4rl1Q8K0S5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn4rl1Q8K0S5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn4rl1Q8K0S5 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.14■■□□□ 1.13
Rtn4rl1Q8K0S5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.14■■□□□ 1.13
Rtn4rl1Q8K0S5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.14■■□□□ 1.13
Rtn4rl1Q8K0S5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Rtn4rl1Q8K0S5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtn4rl1Q8K0S5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtn4rl1Q8K0S5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rtn4rl1Q8K0S5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Rtn4rl1Q8K0S5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtn4rl1Q8K0S5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rtn4rl1Q8K0S5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn4rl1Q8K0S5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn4rl1Q8K0S5 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.12■■□□□ 1.13
Rtn4rl1Q8K0S5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn4rl1Q8K0S5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn4rl1Q8K0S5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.12■■□□□ 1.13
Rtn4rl1Q8K0S5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn4rl1Q8K0S5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn4rl1Q8K0S5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Rtn4rl1Q8K0S5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn4rl1Q8K0S5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms