Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.45■■□□□ 1.5
Trim32Q8CH72 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.44■■□□□ 1.5
Trim32Q8CH72 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim32Q8CH72 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.43■■□□□ 1.5
Trim32Q8CH72 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
Trim32Q8CH72 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim32Q8CH72 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim32Q8CH72 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.43■■□□□ 1.5
Trim32Q8CH72 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Trim32Q8CH72 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim32Q8CH72 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim32Q8CH72 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim32Q8CH72 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim32Q8CH72 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim32Q8CH72 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.42■■□□□ 1.5
Trim32Q8CH72 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim32Q8CH72 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.41■■□□□ 1.5
Trim32Q8CH72 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim32Q8CH72 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.41■■□□□ 1.5
Trim32Q8CH72 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim32Q8CH72 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim32Q8CH72 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trim32Q8CH72 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim32Q8CH72 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim32Q8CH72 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trim32Q8CH72 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim32Q8CH72 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trim32Q8CH72 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trim32Q8CH72 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim32Q8CH72 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim32Q8CH72 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.38■■□□□ 1.49
Trim32Q8CH72 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Trim32Q8CH72 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.38■■□□□ 1.49
Trim32Q8CH72 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim32Q8CH72 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.37■■□□□ 1.49
Trim32Q8CH72 Gm12922-201ENSMUST00000120626 809 ntBASIC24.37■■□□□ 1.49
Trim32Q8CH72 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim32Q8CH72 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim32Q8CH72 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.36■■□□□ 1.49
Trim32Q8CH72 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Trim32Q8CH72 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim32Q8CH72 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Trim32Q8CH72 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.35■■□□□ 1.49
Trim32Q8CH72 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.35■■□□□ 1.49
Trim32Q8CH72 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim32Q8CH72 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.35■■□□□ 1.49
Trim32Q8CH72 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim32Q8CH72 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trim32Q8CH72 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim32Q8CH72 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trim32Q8CH72 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim32Q8CH72 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim32Q8CH72 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.34■■□□□ 1.49
Trim32Q8CH72 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim32Q8CH72 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trim32Q8CH72 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim32Q8CH72 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trim32Q8CH72 Gm27454-201ENSMUST00000185090 204 ntBASIC24.33■■□□□ 1.49
Trim32Q8CH72 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trim32Q8CH72 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim32Q8CH72 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim32Q8CH72 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim32Q8CH72 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Trim32Q8CH72 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim32Q8CH72 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim32Q8CH72 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim32Q8CH72 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim32Q8CH72 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Trim32Q8CH72 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Trim32Q8CH72 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.31■■□□□ 1.48
Trim32Q8CH72 Gm45417-201ENSMUST00000209533 758 ntBASIC24.31■■□□□ 1.48
Trim32Q8CH72 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Trim32Q8CH72 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim32Q8CH72 Gm10399-202ENSMUST00000202768 748 ntBASIC24.3■■□□□ 1.48
Trim32Q8CH72 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim32Q8CH72 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim32Q8CH72 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim32Q8CH72 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim32Q8CH72 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.29■■□□□ 1.48
Trim32Q8CH72 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim32Q8CH72 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim32Q8CH72 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim32Q8CH72 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim32Q8CH72 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trim32Q8CH72 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim32Q8CH72 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim32Q8CH72 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim32Q8CH72 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim32Q8CH72 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms