Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Smc5Q8CG46 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Smc5Q8CG46 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Smc5Q8CG46 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Smc5Q8CG46 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Smc5Q8CG46 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
Smc5Q8CG46 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Smc5Q8CG46 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Smc5Q8CG46 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Smc5Q8CG46 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Smc5Q8CG46 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Smc5Q8CG46 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.89■■□□□ 1.9
Smc5Q8CG46 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.89
Smc5Q8CG46 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smc5Q8CG46 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smc5Q8CG46 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smc5Q8CG46 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Smc5Q8CG46 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
Smc5Q8CG46 Gm44428-201ENSMUST00000204474 874 ntBASIC26.87■■□□□ 1.89
Smc5Q8CG46 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Smc5Q8CG46 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Smc5Q8CG46 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
Smc5Q8CG46 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Smc5Q8CG46 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Smc5Q8CG46 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Smc5Q8CG46 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc5Q8CG46 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.84■■□□□ 1.89
Smc5Q8CG46 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
Smc5Q8CG46 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Smc5Q8CG46 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Smc5Q8CG46 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
Smc5Q8CG46 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Smc5Q8CG46 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Smc5Q8CG46 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.88
Smc5Q8CG46 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Smc5Q8CG46 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smc5Q8CG46 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Smc5Q8CG46 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Smc5Q8CG46 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smc5Q8CG46 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smc5Q8CG46 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Smc5Q8CG46 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smc5Q8CG46 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Smc5Q8CG46 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC26.81■■□□□ 1.88
Smc5Q8CG46 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Smc5Q8CG46 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC26.8■■□□□ 1.88
Smc5Q8CG46 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Smc5Q8CG46 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
Smc5Q8CG46 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Smc5Q8CG46 Gm20634-201ENSMUST00000090779 2956 ntBASIC26.79■■□□□ 1.88
Smc5Q8CG46 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
Smc5Q8CG46 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Smc5Q8CG46 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Smc5Q8CG46 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Smc5Q8CG46 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Smc5Q8CG46 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Smc5Q8CG46 Gm43006-201ENSMUST00000197702 1602 ntBASIC26.78■■□□□ 1.88
Smc5Q8CG46 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Smc5Q8CG46 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Smc5Q8CG46 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC26.77■■□□□ 1.88
Smc5Q8CG46 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Smc5Q8CG46 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Smc5Q8CG46 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Smc5Q8CG46 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Smc5Q8CG46 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Smc5Q8CG46 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Smc5Q8CG46 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Smc5Q8CG46 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.75■■□□□ 1.87
Smc5Q8CG46 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Smc5Q8CG46 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.75■■□□□ 1.87
Smc5Q8CG46 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
Smc5Q8CG46 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Smc5Q8CG46 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Smc5Q8CG46 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Smc5Q8CG46 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Smc5Q8CG46 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
Smc5Q8CG46 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.74■■□□□ 1.87
Smc5Q8CG46 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Smc5Q8CG46 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms