Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.76■□□□□ 0.91
Slc46a2Q8CA03 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.75■□□□□ 0.91
Slc46a2Q8CA03 Terc-201ENSMUST00000082862 423 ntBASIC20.75■□□□□ 0.91
Slc46a2Q8CA03 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc46a2Q8CA03 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc46a2Q8CA03 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Slc46a2Q8CA03 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Slc46a2Q8CA03 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.74■□□□□ 0.91
Slc46a2Q8CA03 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc46a2Q8CA03 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc46a2Q8CA03 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Slc46a2Q8CA03 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc46a2Q8CA03 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc46a2Q8CA03 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc46a2Q8CA03 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc46a2Q8CA03 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Slc46a2Q8CA03 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a2Q8CA03 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a2Q8CA03 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a2Q8CA03 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a2Q8CA03 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a2Q8CA03 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a2Q8CA03 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a2Q8CA03 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a2Q8CA03 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.71■□□□□ 0.91
Slc46a2Q8CA03 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc46a2Q8CA03 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Slc46a2Q8CA03 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc46a2Q8CA03 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.71■□□□□ 0.91
Slc46a2Q8CA03 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc46a2Q8CA03 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc46a2Q8CA03 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.7■□□□□ 0.9
Slc46a2Q8CA03 Mir3960-201ENSMUST00000198213 73 ntBASIC20.7■□□□□ 0.9
Slc46a2Q8CA03 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc46a2Q8CA03 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc46a2Q8CA03 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc46a2Q8CA03 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Slc46a2Q8CA03 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc46a2Q8CA03 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc46a2Q8CA03 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc46a2Q8CA03 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.69■□□□□ 0.9
Slc46a2Q8CA03 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc46a2Q8CA03 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc46a2Q8CA03 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.68■□□□□ 0.9
Slc46a2Q8CA03 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Slc46a2Q8CA03 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc46a2Q8CA03 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.68■□□□□ 0.9
Slc46a2Q8CA03 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Slc46a2Q8CA03 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc46a2Q8CA03 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Slc46a2Q8CA03 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc46a2Q8CA03 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc46a2Q8CA03 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc46a2Q8CA03 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Slc46a2Q8CA03 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc46a2Q8CA03 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.66■□□□□ 0.9
Slc46a2Q8CA03 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc46a2Q8CA03 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc46a2Q8CA03 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc46a2Q8CA03 Notumos-201ENSMUST00000151998 2659 ntBASIC20.65■□□□□ 0.9
Slc46a2Q8CA03 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc46a2Q8CA03 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc46a2Q8CA03 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc46a2Q8CA03 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc46a2Q8CA03 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc46a2Q8CA03 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.65■□□□□ 0.9
Slc46a2Q8CA03 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc46a2Q8CA03 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc46a2Q8CA03 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc46a2Q8CA03 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Slc46a2Q8CA03 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc46a2Q8CA03 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Slc46a2Q8CA03 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc46a2Q8CA03 Gm45364-201ENSMUST00000210883 159 ntBASIC20.63■□□□□ 0.89
Slc46a2Q8CA03 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.63■□□□□ 0.89
Slc46a2Q8CA03 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc46a2Q8CA03 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc46a2Q8CA03 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc46a2Q8CA03 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc46a2Q8CA03 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Slc46a2Q8CA03 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc46a2Q8CA03 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc46a2Q8CA03 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Slc46a2Q8CA03 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc46a2Q8CA03 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc46a2Q8CA03 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc46a2Q8CA03 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slc46a2Q8CA03 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms