Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.17■□□□□ 0.98
Cfap54Q8C6S9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap54Q8C6S9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cfap54Q8C6S9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.17■□□□□ 0.98
Cfap54Q8C6S9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap54Q8C6S9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Cfap54Q8C6S9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.16■□□□□ 0.98
Cfap54Q8C6S9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cfap54Q8C6S9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap54Q8C6S9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap54Q8C6S9 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.15■□□□□ 0.98
Cfap54Q8C6S9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.15■□□□□ 0.98
Cfap54Q8C6S9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cfap54Q8C6S9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap54Q8C6S9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.15■□□□□ 0.98
Cfap54Q8C6S9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap54Q8C6S9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cfap54Q8C6S9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Cfap54Q8C6S9 Gm8495-201ENSMUST00000188740 694 ntBASIC21.14■□□□□ 0.98
Cfap54Q8C6S9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Cfap54Q8C6S9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cfap54Q8C6S9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cfap54Q8C6S9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cfap54Q8C6S9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cfap54Q8C6S9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.14■□□□□ 0.97
Cfap54Q8C6S9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.13■□□□□ 0.97
Cfap54Q8C6S9 Gm45417-201ENSMUST00000209533 758 ntBASIC21.13■□□□□ 0.97
Cfap54Q8C6S9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap54Q8C6S9 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.13■□□□□ 0.97
Cfap54Q8C6S9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap54Q8C6S9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap54Q8C6S9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.12■□□□□ 0.97
Cfap54Q8C6S9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap54Q8C6S9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap54Q8C6S9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.12■□□□□ 0.97
Cfap54Q8C6S9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap54Q8C6S9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap54Q8C6S9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Cfap54Q8C6S9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap54Q8C6S9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap54Q8C6S9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap54Q8C6S9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap54Q8C6S9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap54Q8C6S9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap54Q8C6S9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.09■□□□□ 0.97
Cfap54Q8C6S9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.09■□□□□ 0.97
Cfap54Q8C6S9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cfap54Q8C6S9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cfap54Q8C6S9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfap54Q8C6S9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfap54Q8C6S9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap54Q8C6S9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap54Q8C6S9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap54Q8C6S9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.08■□□□□ 0.97
Cfap54Q8C6S9 Gm18284-201ENSMUST00000172604 624 ntBASIC21.08■□□□□ 0.96
Cfap54Q8C6S9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
Cfap54Q8C6S9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cfap54Q8C6S9 Gm29257-201ENSMUST00000186115 639 ntBASIC21.07■□□□□ 0.96
Cfap54Q8C6S9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.07■□□□□ 0.96
Cfap54Q8C6S9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap54Q8C6S9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap54Q8C6S9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap54Q8C6S9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.07■□□□□ 0.96
Cfap54Q8C6S9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap54Q8C6S9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cfap54Q8C6S9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap54Q8C6S9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.05■□□□□ 0.96
Cfap54Q8C6S9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.04■□□□□ 0.96
Cfap54Q8C6S9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap54Q8C6S9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap54Q8C6S9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap54Q8C6S9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfap54Q8C6S9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfap54Q8C6S9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfap54Q8C6S9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.03■□□□□ 0.96
Cfap54Q8C6S9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.03■□□□□ 0.96
Cfap54Q8C6S9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.03■□□□□ 0.96
Cfap54Q8C6S9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cfap54Q8C6S9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap54Q8C6S9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms