Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ckap4Q8BMK4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.33■□□□□ 0.84
Ckap4Q8BMK4 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.33■□□□□ 0.84
Ckap4Q8BMK4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ckap4Q8BMK4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ckap4Q8BMK4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ckap4Q8BMK4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ckap4Q8BMK4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ckap4Q8BMK4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ckap4Q8BMK4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ckap4Q8BMK4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ckap4Q8BMK4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Scarna2-201ENSMUST00000157560 414 ntBASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Gm9806-201ENSMUST00000051080 552 ntBASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ckap4Q8BMK4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ckap4Q8BMK4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap4Q8BMK4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap4Q8BMK4 Gm11687-201ENSMUST00000118911 886 ntBASIC20.29■□□□□ 0.84
Ckap4Q8BMK4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ckap4Q8BMK4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Ckap4Q8BMK4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ckap4Q8BMK4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap4Q8BMK4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap4Q8BMK4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap4Q8BMK4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.28■□□□□ 0.84
Ckap4Q8BMK4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ckap4Q8BMK4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap4Q8BMK4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ckap4Q8BMK4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap4Q8BMK4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ckap4Q8BMK4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap4Q8BMK4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap4Q8BMK4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap4Q8BMK4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ckap4Q8BMK4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap4Q8BMK4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.26■□□□□ 0.83
Ckap4Q8BMK4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap4Q8BMK4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap4Q8BMK4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap4Q8BMK4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ckap4Q8BMK4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ckap4Q8BMK4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap4Q8BMK4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap4Q8BMK4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap4Q8BMK4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap4Q8BMK4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap4Q8BMK4 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.25■□□□□ 0.83
Ckap4Q8BMK4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ckap4Q8BMK4 Gm16437-201ENSMUST00000025669 507 ntBASIC20.25■□□□□ 0.83
Ckap4Q8BMK4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap4Q8BMK4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap4Q8BMK4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap4Q8BMK4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap4Q8BMK4 Notumos-201ENSMUST00000151998 2659 ntBASIC20.24■□□□□ 0.83
Ckap4Q8BMK4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap4Q8BMK4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap4Q8BMK4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ckap4Q8BMK4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap4Q8BMK4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap4Q8BMK4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap4Q8BMK4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap4Q8BMK4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap4Q8BMK4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap4Q8BMK4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap4Q8BMK4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.22■□□□□ 0.83
Ckap4Q8BMK4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap4Q8BMK4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap4Q8BMK4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ckap4Q8BMK4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap4Q8BMK4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap4Q8BMK4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Ckap4Q8BMK4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ckap4Q8BMK4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Ckap4Q8BMK4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ckap4Q8BMK4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ckap4Q8BMK4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ckap4Q8BMK4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.2■□□□□ 0.82
Ckap4Q8BMK4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.19■□□□□ 0.82
Ckap4Q8BMK4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap4Q8BMK4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap4Q8BMK4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms