Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC29.25■■■□□ 2.27
Col16a1Q8BLX7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Col16a1Q8BLX7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Col16a1Q8BLX7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Col16a1Q8BLX7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Col16a1Q8BLX7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC29.22■■■□□ 2.27
Col16a1Q8BLX7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Col16a1Q8BLX7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC29.21■■■□□ 2.27
Col16a1Q8BLX7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Col16a1Q8BLX7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Col16a1Q8BLX7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Col16a1Q8BLX7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC29.2■■■□□ 2.27
Col16a1Q8BLX7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Col16a1Q8BLX7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC29.19■■■□□ 2.26
Col16a1Q8BLX7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Col16a1Q8BLX7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC29.19■■■□□ 2.26
Col16a1Q8BLX7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Col16a1Q8BLX7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC29.18■■■□□ 2.26
Col16a1Q8BLX7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Col16a1Q8BLX7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Col16a1Q8BLX7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Col16a1Q8BLX7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Col16a1Q8BLX7 Gm28731-201ENSMUST00000185564 1569 ntBASIC29.17■■■□□ 2.26
Col16a1Q8BLX7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Col16a1Q8BLX7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Col16a1Q8BLX7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Col16a1Q8BLX7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Col16a1Q8BLX7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC29.16■■■□□ 2.26
Col16a1Q8BLX7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Col16a1Q8BLX7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Col16a1Q8BLX7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC29.15■■■□□ 2.26
Col16a1Q8BLX7 Gm27454-201ENSMUST00000185090 204 ntBASIC29.15■■■□□ 2.26
Col16a1Q8BLX7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Col16a1Q8BLX7 AC140930.3-201ENSMUST00000222935 274 ntBASIC29.15■■■□□ 2.26
Col16a1Q8BLX7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Col16a1Q8BLX7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
Col16a1Q8BLX7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Col16a1Q8BLX7 Appbp2os-202ENSMUST00000206972 447 ntBASIC29.14■■■□□ 2.26
Col16a1Q8BLX7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Col16a1Q8BLX7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Col16a1Q8BLX7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Col16a1Q8BLX7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col16a1Q8BLX7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col16a1Q8BLX7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Col16a1Q8BLX7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Col16a1Q8BLX7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Col16a1Q8BLX7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Col16a1Q8BLX7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Col16a1Q8BLX7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Col16a1Q8BLX7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC29.1■■■□□ 2.25
Col16a1Q8BLX7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Col16a1Q8BLX7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Col16a1Q8BLX7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
Col16a1Q8BLX7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC29.09■■■□□ 2.25
Col16a1Q8BLX7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Col16a1Q8BLX7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Col16a1Q8BLX7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Col16a1Q8BLX7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Col16a1Q8BLX7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Col16a1Q8BLX7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Col16a1Q8BLX7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Col16a1Q8BLX7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
Col16a1Q8BLX7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Col16a1Q8BLX7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 Gm10399-202ENSMUST00000202768 748 ntBASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Col16a1Q8BLX7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Col16a1Q8BLX7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Col16a1Q8BLX7 Gm11847-201ENSMUST00000125165 1119 ntBASIC29.06■■■□□ 2.24
Col16a1Q8BLX7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC29.06■■■□□ 2.24
Col16a1Q8BLX7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC29.06■■■□□ 2.24
Col16a1Q8BLX7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Col16a1Q8BLX7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col16a1Q8BLX7 Gm45417-201ENSMUST00000209533 758 ntBASIC29.05■■■□□ 2.24
Col16a1Q8BLX7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC29.05■■■□□ 2.24
Col16a1Q8BLX7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Col16a1Q8BLX7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Col16a1Q8BLX7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Col16a1Q8BLX7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC29.04■■■□□ 2.24
Col16a1Q8BLX7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC29.04■■■□□ 2.24
Col16a1Q8BLX7 Gm12821-201ENSMUST00000120022 600 ntBASIC29.04■■■□□ 2.24
Col16a1Q8BLX7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Col16a1Q8BLX7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Col16a1Q8BLX7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Col16a1Q8BLX7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Col16a1Q8BLX7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Col16a1Q8BLX7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Col16a1Q8BLX7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Col16a1Q8BLX7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Col16a1Q8BLX7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
Col16a1Q8BLX7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC29.02■■■□□ 2.24
Col16a1Q8BLX7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Col16a1Q8BLX7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC29.02■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms