Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp2bQ8BJF9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp2bQ8BJF9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp2bQ8BJF9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp2bQ8BJF9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp2bQ8BJF9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp2bQ8BJF9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp2bQ8BJF9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp2bQ8BJF9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp2bQ8BJF9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp2bQ8BJF9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp2bQ8BJF9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.02■■□□□ 1.11
Chmp2bQ8BJF9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.01■■□□□ 1.11
Chmp2bQ8BJF9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp2bQ8BJF9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Chmp2bQ8BJF9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp2bQ8BJF9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp2bQ8BJF9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp2bQ8BJF9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Chmp2bQ8BJF9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Chmp2bQ8BJF9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chmp2bQ8BJF9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chmp2bQ8BJF9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chmp2bQ8BJF9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Chmp2bQ8BJF9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Chmp2bQ8BJF9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22■■□□□ 1.11
Chmp2bQ8BJF9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp2bQ8BJF9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp2bQ8BJF9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp2bQ8BJF9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Chmp2bQ8BJF9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp2bQ8BJF9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp2bQ8BJF9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Chmp2bQ8BJF9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp2bQ8BJF9 Gm6311-201ENSMUST00000073790 878 ntBASIC21.98■■□□□ 1.11
Chmp2bQ8BJF9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
Chmp2bQ8BJF9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp2bQ8BJF9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.97■■□□□ 1.11
Chmp2bQ8BJF9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp2bQ8BJF9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp2bQ8BJF9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp2bQ8BJF9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp2bQ8BJF9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chmp2bQ8BJF9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp2bQ8BJF9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp2bQ8BJF9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp2bQ8BJF9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Chmp2bQ8BJF9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Chmp2bQ8BJF9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Chmp2bQ8BJF9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.95■■□□□ 1.1
Chmp2bQ8BJF9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp2bQ8BJF9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.95■■□□□ 1.1
Chmp2bQ8BJF9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp2bQ8BJF9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp2bQ8BJF9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp2bQ8BJF9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp2bQ8BJF9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.94■■□□□ 1.1
Chmp2bQ8BJF9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.94■■□□□ 1.1
Chmp2bQ8BJF9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.94■■□□□ 1.1
Chmp2bQ8BJF9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp2bQ8BJF9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp2bQ8BJF9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp2bQ8BJF9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp2bQ8BJF9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp2bQ8BJF9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp2bQ8BJF9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.93■■□□□ 1.1
Chmp2bQ8BJF9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp2bQ8BJF9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp2bQ8BJF9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp2bQ8BJF9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp2bQ8BJF9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp2bQ8BJF9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chmp2bQ8BJF9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.92■■□□□ 1.1
Chmp2bQ8BJF9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chmp2bQ8BJF9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp2bQ8BJF9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp2bQ8BJF9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Chmp2bQ8BJF9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Chmp2bQ8BJF9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Chmp2bQ8BJF9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.91■■□□□ 1.1
Chmp2bQ8BJF9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp2bQ8BJF9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp2bQ8BJF9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.9■■□□□ 1.1
Chmp2bQ8BJF9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp2bQ8BJF9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp2bQ8BJF9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp2bQ8BJF9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Chmp2bQ8BJF9 Notumos-201ENSMUST00000151998 2659 ntBASIC21.89■■□□□ 1.1
Chmp2bQ8BJF9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.89■■□□□ 1.09
Chmp2bQ8BJF9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp2bQ8BJF9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.89■■□□□ 1.09
Chmp2bQ8BJF9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2bQ8BJF9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.88■■□□□ 1.09
Chmp2bQ8BJF9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2bQ8BJF9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Chmp2bQ8BJF9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2bQ8BJF9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Chmp2bQ8BJF9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms