Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim23Q8BGX0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim23Q8BGX0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim23Q8BGX0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Gm5812-201ENSMUST00000061073 957 ntBASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim23Q8BGX0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim23Q8BGX0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim23Q8BGX0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim23Q8BGX0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.86■□□□□ 0.93
Trim23Q8BGX0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim23Q8BGX0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim23Q8BGX0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim23Q8BGX0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim23Q8BGX0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim23Q8BGX0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim23Q8BGX0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trim23Q8BGX0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim23Q8BGX0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Trim23Q8BGX0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.83■□□□□ 0.93
Trim23Q8BGX0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim23Q8BGX0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim23Q8BGX0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim23Q8BGX0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim23Q8BGX0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim23Q8BGX0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.82■□□□□ 0.92
Trim23Q8BGX0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim23Q8BGX0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.82■□□□□ 0.92
Trim23Q8BGX0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trim23Q8BGX0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.81■□□□□ 0.92
Trim23Q8BGX0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim23Q8BGX0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim23Q8BGX0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim23Q8BGX0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim23Q8BGX0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim23Q8BGX0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim23Q8BGX0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.8■□□□□ 0.92
Trim23Q8BGX0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim23Q8BGX0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim23Q8BGX0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim23Q8BGX0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.8■□□□□ 0.92
Trim23Q8BGX0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim23Q8BGX0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim23Q8BGX0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim23Q8BGX0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim23Q8BGX0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim23Q8BGX0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim23Q8BGX0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim23Q8BGX0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim23Q8BGX0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim23Q8BGX0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim23Q8BGX0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim23Q8BGX0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim23Q8BGX0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Trim23Q8BGX0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim23Q8BGX0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim23Q8BGX0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Trim23Q8BGX0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim23Q8BGX0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim23Q8BGX0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim23Q8BGX0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim23Q8BGX0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim23Q8BGX0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim23Q8BGX0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim23Q8BGX0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim23Q8BGX0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim23Q8BGX0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim23Q8BGX0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim23Q8BGX0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim23Q8BGX0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim23Q8BGX0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms