Protein–RNA interactions for Protein: Q8BGR1

Pdzph1, MCG20355, mousemouse

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzph1Q8BGR1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Pdzph1Q8BGR1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pdzph1Q8BGR1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pdzph1Q8BGR1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Pdzph1Q8BGR1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pdzph1Q8BGR1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pdzph1Q8BGR1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pdzph1Q8BGR1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC26.46■■□□□ 1.83
Pdzph1Q8BGR1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Pdzph1Q8BGR1 Gm8093-201ENSMUST00000128935 1892 ntBASIC26.46■■□□□ 1.83
Pdzph1Q8BGR1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Pdzph1Q8BGR1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pdzph1Q8BGR1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.82
Pdzph1Q8BGR1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.45■■□□□ 1.82
Pdzph1Q8BGR1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pdzph1Q8BGR1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.44■■□□□ 1.82
Pdzph1Q8BGR1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Pdzph1Q8BGR1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pdzph1Q8BGR1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pdzph1Q8BGR1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pdzph1Q8BGR1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pdzph1Q8BGR1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Pdzph1Q8BGR1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Pdzph1Q8BGR1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pdzph1Q8BGR1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pdzph1Q8BGR1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pdzph1Q8BGR1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC26.41■■□□□ 1.82
Pdzph1Q8BGR1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.41■■□□□ 1.82
Pdzph1Q8BGR1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Pdzph1Q8BGR1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pdzph1Q8BGR1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC26.4■■□□□ 1.82
Pdzph1Q8BGR1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.4■■□□□ 1.82
Pdzph1Q8BGR1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pdzph1Q8BGR1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.39■■□□□ 1.82
Pdzph1Q8BGR1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pdzph1Q8BGR1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.39■■□□□ 1.82
Pdzph1Q8BGR1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pdzph1Q8BGR1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pdzph1Q8BGR1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.38■■□□□ 1.81
Pdzph1Q8BGR1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC26.37■■□□□ 1.81
Pdzph1Q8BGR1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pdzph1Q8BGR1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Pdzph1Q8BGR1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pdzph1Q8BGR1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.37■■□□□ 1.81
Pdzph1Q8BGR1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pdzph1Q8BGR1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pdzph1Q8BGR1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC26.36■■□□□ 1.81
Pdzph1Q8BGR1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pdzph1Q8BGR1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pdzph1Q8BGR1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Pdzph1Q8BGR1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pdzph1Q8BGR1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pdzph1Q8BGR1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pdzph1Q8BGR1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Pdzph1Q8BGR1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.34■■□□□ 1.81
Pdzph1Q8BGR1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC26.34■■□□□ 1.81
Pdzph1Q8BGR1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC26.34■■□□□ 1.81
Pdzph1Q8BGR1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.33■■□□□ 1.81
Pdzph1Q8BGR1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pdzph1Q8BGR1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pdzph1Q8BGR1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pdzph1Q8BGR1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC26.32■■□□□ 1.8
Pdzph1Q8BGR1 Gm8495-201ENSMUST00000188740 694 ntBASIC26.32■■□□□ 1.8
Pdzph1Q8BGR1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pdzph1Q8BGR1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pdzph1Q8BGR1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pdzph1Q8BGR1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pdzph1Q8BGR1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pdzph1Q8BGR1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pdzph1Q8BGR1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC26.3■■□□□ 1.8
Pdzph1Q8BGR1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Pdzph1Q8BGR1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdzph1Q8BGR1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdzph1Q8BGR1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Pdzph1Q8BGR1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Pdzph1Q8BGR1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdzph1Q8BGR1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdzph1Q8BGR1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdzph1Q8BGR1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Pdzph1Q8BGR1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Pdzph1Q8BGR1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pdzph1Q8BGR1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pdzph1Q8BGR1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pdzph1Q8BGR1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pdzph1Q8BGR1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Pdzph1Q8BGR1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC26.26■■□□□ 1.79
Pdzph1Q8BGR1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Pdzph1Q8BGR1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pdzph1Q8BGR1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pdzph1Q8BGR1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pdzph1Q8BGR1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms