Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.55■□□□□ 0.4
Vma21Q78T54 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vma21Q78T54 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vma21Q78T54 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vma21Q78T54 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vma21Q78T54 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vma21Q78T54 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vma21Q78T54 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.54■□□□□ 0.4
Vma21Q78T54 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.54■□□□□ 0.4
Vma21Q78T54 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vma21Q78T54 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vma21Q78T54 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vma21Q78T54 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vma21Q78T54 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vma21Q78T54 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.53■□□□□ 0.4
Vma21Q78T54 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.53■□□□□ 0.4
Vma21Q78T54 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vma21Q78T54 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vma21Q78T54 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vma21Q78T54 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.53■□□□□ 0.4
Vma21Q78T54 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vma21Q78T54 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vma21Q78T54 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vma21Q78T54 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vma21Q78T54 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vma21Q78T54 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vma21Q78T54 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.52■□□□□ 0.4
Vma21Q78T54 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vma21Q78T54 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vma21Q78T54 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vma21Q78T54 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vma21Q78T54 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vma21Q78T54 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vma21Q78T54 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vma21Q78T54 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.51■□□□□ 0.39
Vma21Q78T54 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vma21Q78T54 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vma21Q78T54 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vma21Q78T54 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vma21Q78T54 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vma21Q78T54 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vma21Q78T54 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vma21Q78T54 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vma21Q78T54 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vma21Q78T54 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Vma21Q78T54 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vma21Q78T54 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vma21Q78T54 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vma21Q78T54 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vma21Q78T54 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vma21Q78T54 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vma21Q78T54 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.48■□□□□ 0.39
Vma21Q78T54 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vma21Q78T54 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vma21Q78T54 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vma21Q78T54 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vma21Q78T54 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vma21Q78T54 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.47■□□□□ 0.39
Vma21Q78T54 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vma21Q78T54 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vma21Q78T54 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vma21Q78T54 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vma21Q78T54 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vma21Q78T54 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vma21Q78T54 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vma21Q78T54 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vma21Q78T54 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vma21Q78T54 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.46■□□□□ 0.39
Vma21Q78T54 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vma21Q78T54 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vma21Q78T54 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vma21Q78T54 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vma21Q78T54 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vma21Q78T54 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vma21Q78T54 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vma21Q78T54 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vma21Q78T54 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.45■□□□□ 0.38
Vma21Q78T54 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.45■□□□□ 0.38
Vma21Q78T54 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vma21Q78T54 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vma21Q78T54 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.44■□□□□ 0.38
Vma21Q78T54 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Vma21Q78T54 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.44■□□□□ 0.38
Vma21Q78T54 Gm6311-201ENSMUST00000073790 878 ntBASIC17.44■□□□□ 0.38
Vma21Q78T54 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vma21Q78T54 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vma21Q78T54 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vma21Q78T54 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vma21Q78T54 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vma21Q78T54 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vma21Q78T54 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms