Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cspg5Q71M36 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cspg5Q71M36 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.22■■□□□ 1.15
Cspg5Q71M36 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Cspg5Q71M36 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.22■■□□□ 1.15
Cspg5Q71M36 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Cspg5Q71M36 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cspg5Q71M36 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cspg5Q71M36 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cspg5Q71M36 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cspg5Q71M36 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cspg5Q71M36 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cspg5Q71M36 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cspg5Q71M36 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.21■■□□□ 1.15
Cspg5Q71M36 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cspg5Q71M36 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cspg5Q71M36 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cspg5Q71M36 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Cspg5Q71M36 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cspg5Q71M36 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.2■■□□□ 1.14
Cspg5Q71M36 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cspg5Q71M36 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cspg5Q71M36 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cspg5Q71M36 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cspg5Q71M36 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cspg5Q71M36 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cspg5Q71M36 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cspg5Q71M36 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cspg5Q71M36 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cspg5Q71M36 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cspg5Q71M36 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Cspg5Q71M36 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.18■■□□□ 1.14
Cspg5Q71M36 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cspg5Q71M36 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cspg5Q71M36 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.18■■□□□ 1.14
Cspg5Q71M36 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cspg5Q71M36 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cspg5Q71M36 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cspg5Q71M36 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Cspg5Q71M36 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cspg5Q71M36 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cspg5Q71M36 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cspg5Q71M36 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Cspg5Q71M36 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cspg5Q71M36 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cspg5Q71M36 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cspg5Q71M36 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cspg5Q71M36 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cspg5Q71M36 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cspg5Q71M36 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.15■■□□□ 1.14
Cspg5Q71M36 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Cspg5Q71M36 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cspg5Q71M36 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cspg5Q71M36 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cspg5Q71M36 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cspg5Q71M36 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cspg5Q71M36 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cspg5Q71M36 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.14■■□□□ 1.13
Cspg5Q71M36 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cspg5Q71M36 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cspg5Q71M36 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cspg5Q71M36 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cspg5Q71M36 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cspg5Q71M36 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Cspg5Q71M36 Gm7417-201ENSMUST00000192950 473 ntBASIC22.13■■□□□ 1.13
Cspg5Q71M36 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.13■■□□□ 1.13
Cspg5Q71M36 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.13■■□□□ 1.13
Cspg5Q71M36 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cspg5Q71M36 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.13■■□□□ 1.13
Cspg5Q71M36 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cspg5Q71M36 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cspg5Q71M36 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Cspg5Q71M36 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cspg5Q71M36 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cspg5Q71M36 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Cspg5Q71M36 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cspg5Q71M36 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cspg5Q71M36 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cspg5Q71M36 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.11■■□□□ 1.13
Cspg5Q71M36 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cspg5Q71M36 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cspg5Q71M36 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cspg5Q71M36 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cspg5Q71M36 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.1■■□□□ 1.13
Cspg5Q71M36 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cspg5Q71M36 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cspg5Q71M36 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cspg5Q71M36 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cspg5Q71M36 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.09■■□□□ 1.13
Cspg5Q71M36 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.09■■□□□ 1.13
Cspg5Q71M36 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cspg5Q71M36 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.08■■□□□ 1.13
Cspg5Q71M36 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Cspg5Q71M36 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Cspg5Q71M36 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cspg5Q71M36 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cspg5Q71M36 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cspg5Q71M36 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.07■■□□□ 1.12
Cspg5Q71M36 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cspg5Q71M36 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 787.3 ms