Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cachd1Q6PDJ1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cachd1Q6PDJ1 Gm6139-201ENSMUST00000079261 882 ntBASIC22.04■■□□□ 1.12
Cachd1Q6PDJ1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cachd1Q6PDJ1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cachd1Q6PDJ1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cachd1Q6PDJ1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cachd1Q6PDJ1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Gm42569-201ENSMUST00000200539 472 ntBASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cachd1Q6PDJ1 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.02■■□□□ 1.12
Cachd1Q6PDJ1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.02■■□□□ 1.12
Cachd1Q6PDJ1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cachd1Q6PDJ1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cachd1Q6PDJ1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cachd1Q6PDJ1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
Cachd1Q6PDJ1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cachd1Q6PDJ1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cachd1Q6PDJ1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.01■■□□□ 1.11
Cachd1Q6PDJ1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.01■■□□□ 1.11
Cachd1Q6PDJ1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Cachd1Q6PDJ1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Cachd1Q6PDJ1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cachd1Q6PDJ1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cachd1Q6PDJ1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22■■□□□ 1.11
Cachd1Q6PDJ1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22■■□□□ 1.11
Cachd1Q6PDJ1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cachd1Q6PDJ1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cachd1Q6PDJ1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cachd1Q6PDJ1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.99■■□□□ 1.11
Cachd1Q6PDJ1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cachd1Q6PDJ1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
Cachd1Q6PDJ1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
Cachd1Q6PDJ1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.97■■□□□ 1.11
Cachd1Q6PDJ1 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.97■■□□□ 1.11
Cachd1Q6PDJ1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cachd1Q6PDJ1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cachd1Q6PDJ1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cachd1Q6PDJ1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cachd1Q6PDJ1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cachd1Q6PDJ1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cachd1Q6PDJ1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.95■■□□□ 1.1
Cachd1Q6PDJ1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.95■■□□□ 1.1
Cachd1Q6PDJ1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Cachd1Q6PDJ1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Cachd1Q6PDJ1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
Cachd1Q6PDJ1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.94■■□□□ 1.1
Cachd1Q6PDJ1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Cachd1Q6PDJ1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.94■■□□□ 1.1
Cachd1Q6PDJ1 Gm37179-201ENSMUST00000194862 823 ntBASIC21.94■■□□□ 1.1
Cachd1Q6PDJ1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cachd1Q6PDJ1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cachd1Q6PDJ1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cachd1Q6PDJ1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cachd1Q6PDJ1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cachd1Q6PDJ1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cachd1Q6PDJ1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cachd1Q6PDJ1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Cachd1Q6PDJ1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.92■■□□□ 1.1
Cachd1Q6PDJ1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cachd1Q6PDJ1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cachd1Q6PDJ1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Cachd1Q6PDJ1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.91■■□□□ 1.1
Cachd1Q6PDJ1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cachd1Q6PDJ1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cachd1Q6PDJ1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.9■■□□□ 1.1
Cachd1Q6PDJ1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.9■■□□□ 1.1
Cachd1Q6PDJ1 Gm27801-201ENSMUST00000184174 223 ntBASIC21.9■■□□□ 1.1
Cachd1Q6PDJ1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cachd1Q6PDJ1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cachd1Q6PDJ1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.89■■□□□ 1.09
Cachd1Q6PDJ1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cachd1Q6PDJ1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cachd1Q6PDJ1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cachd1Q6PDJ1 Gm43017-201ENSMUST00000198296 752 ntBASIC21.88■■□□□ 1.09
Cachd1Q6PDJ1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.88■■□□□ 1.09
Cachd1Q6PDJ1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cachd1Q6PDJ1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.88■■□□□ 1.09
Cachd1Q6PDJ1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.87■■□□□ 1.09
Cachd1Q6PDJ1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Cachd1Q6PDJ1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.87■■□□□ 1.09
Cachd1Q6PDJ1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cachd1Q6PDJ1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cachd1Q6PDJ1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cachd1Q6PDJ1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.86■■□□□ 1.09
Cachd1Q6PDJ1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cachd1Q6PDJ1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cachd1Q6PDJ1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cachd1Q6PDJ1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cachd1Q6PDJ1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cachd1Q6PDJ1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cachd1Q6PDJ1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cachd1Q6PDJ1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms