Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
ShbQ6PD21 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ShbQ6PD21 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
ShbQ6PD21 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
ShbQ6PD21 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ShbQ6PD21 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ShbQ6PD21 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.18■■□□□ 1.46
ShbQ6PD21 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.18■■□□□ 1.46
ShbQ6PD21 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ShbQ6PD21 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
ShbQ6PD21 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ShbQ6PD21 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ShbQ6PD21 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ShbQ6PD21 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC24.17■■□□□ 1.46
ShbQ6PD21 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.17■■□□□ 1.46
ShbQ6PD21 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ShbQ6PD21 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ShbQ6PD21 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ShbQ6PD21 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ShbQ6PD21 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ShbQ6PD21 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ShbQ6PD21 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.15■■□□□ 1.46
ShbQ6PD21 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ShbQ6PD21 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ShbQ6PD21 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ShbQ6PD21 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ShbQ6PD21 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
ShbQ6PD21 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.14■■□□□ 1.46
ShbQ6PD21 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.14■■□□□ 1.45
ShbQ6PD21 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.14■■□□□ 1.45
ShbQ6PD21 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ShbQ6PD21 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
ShbQ6PD21 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
ShbQ6PD21 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ShbQ6PD21 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ShbQ6PD21 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ShbQ6PD21 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ShbQ6PD21 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ShbQ6PD21 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ShbQ6PD21 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ShbQ6PD21 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ShbQ6PD21 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ShbQ6PD21 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.12■■□□□ 1.45
ShbQ6PD21 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ShbQ6PD21 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ShbQ6PD21 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.11■■□□□ 1.45
ShbQ6PD21 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
ShbQ6PD21 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.11■■□□□ 1.45
ShbQ6PD21 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ShbQ6PD21 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ShbQ6PD21 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ShbQ6PD21 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ShbQ6PD21 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.1■■□□□ 1.45
ShbQ6PD21 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ShbQ6PD21 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ShbQ6PD21 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ShbQ6PD21 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.09■■□□□ 1.45
ShbQ6PD21 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ShbQ6PD21 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.08■■□□□ 1.45
ShbQ6PD21 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
ShbQ6PD21 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.08■■□□□ 1.44
ShbQ6PD21 Gm29257-201ENSMUST00000186115 639 ntBASIC24.07■■□□□ 1.44
ShbQ6PD21 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ShbQ6PD21 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ShbQ6PD21 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
ShbQ6PD21 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
ShbQ6PD21 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ShbQ6PD21 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ShbQ6PD21 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ShbQ6PD21 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ShbQ6PD21 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ShbQ6PD21 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ShbQ6PD21 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ShbQ6PD21 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ShbQ6PD21 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ShbQ6PD21 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ShbQ6PD21 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.04■■□□□ 1.44
ShbQ6PD21 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.04■■□□□ 1.44
ShbQ6PD21 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
ShbQ6PD21 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.04■■□□□ 1.44
ShbQ6PD21 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.04■■□□□ 1.44
ShbQ6PD21 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
ShbQ6PD21 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC24.03■■□□□ 1.44
ShbQ6PD21 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ShbQ6PD21 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC24.03■■□□□ 1.44
ShbQ6PD21 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ShbQ6PD21 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ShbQ6PD21 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ShbQ6PD21 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ShbQ6PD21 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
ShbQ6PD21 Gm6139-201ENSMUST00000079261 882 ntBASIC24.01■■□□□ 1.43
ShbQ6PD21 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ShbQ6PD21 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ShbQ6PD21 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ShbQ6PD21 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
ShbQ6PD21 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
ShbQ6PD21 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
ShbQ6PD21 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ShbQ6PD21 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.99■■□□□ 1.43
ShbQ6PD21 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.99■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms