Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Col11a2Q64739 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Col11a2Q64739 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Col11a2Q64739 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Col11a2Q64739 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col11a2Q64739 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col11a2Q64739 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col11a2Q64739 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col11a2Q64739 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Col11a2Q64739 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC27.11■■□□□ 1.93
Col11a2Q64739 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
Col11a2Q64739 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col11a2Q64739 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.1■■□□□ 1.93
Col11a2Q64739 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col11a2Q64739 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col11a2Q64739 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Col11a2Q64739 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Col11a2Q64739 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Col11a2Q64739 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC27.08■■□□□ 1.93
Col11a2Q64739 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Col11a2Q64739 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC27.08■■□□□ 1.93
Col11a2Q64739 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Col11a2Q64739 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Col11a2Q64739 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC27.07■■□□□ 1.92
Col11a2Q64739 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC27.07■■□□□ 1.92
Col11a2Q64739 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col11a2Q64739 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col11a2Q64739 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Col11a2Q64739 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Col11a2Q64739 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col11a2Q64739 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC27.07■■□□□ 1.92
Col11a2Q64739 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Col11a2Q64739 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Col11a2Q64739 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC27.06■■□□□ 1.92
Col11a2Q64739 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Col11a2Q64739 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Col11a2Q64739 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Col11a2Q64739 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Col11a2Q64739 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Col11a2Q64739 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Col11a2Q64739 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Col11a2Q64739 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC27.03■■□□□ 1.92
Col11a2Q64739 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Col11a2Q64739 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col11a2Q64739 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col11a2Q64739 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Col11a2Q64739 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col11a2Q64739 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC27.02■■□□□ 1.92
Col11a2Q64739 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Col11a2Q64739 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Col11a2Q64739 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col11a2Q64739 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col11a2Q64739 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col11a2Q64739 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC26.99■■□□□ 1.91
Col11a2Q64739 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26.99■■□□□ 1.91
Col11a2Q64739 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Col11a2Q64739 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC26.99■■□□□ 1.91
Col11a2Q64739 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Col11a2Q64739 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.99■■□□□ 1.91
Col11a2Q64739 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
Col11a2Q64739 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC26.99■■□□□ 1.91
Col11a2Q64739 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col11a2Q64739 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC26.98■■□□□ 1.91
Col11a2Q64739 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col11a2Q64739 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Col11a2Q64739 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
Col11a2Q64739 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Col11a2Q64739 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
Col11a2Q64739 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col11a2Q64739 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col11a2Q64739 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col11a2Q64739 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Col11a2Q64739 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Col11a2Q64739 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col11a2Q64739 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col11a2Q64739 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col11a2Q64739 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col11a2Q64739 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Col11a2Q64739 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.94■■□□□ 1.9
Col11a2Q64739 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.94■■□□□ 1.9
Col11a2Q64739 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col11a2Q64739 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col11a2Q64739 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col11a2Q64739 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col11a2Q64739 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col11a2Q64739 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col11a2Q64739 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Col11a2Q64739 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Col11a2Q64739 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col11a2Q64739 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Col11a2Q64739 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col11a2Q64739 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Col11a2Q64739 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Col11a2Q64739 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col11a2Q64739 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col11a2Q64739 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col11a2Q64739 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col11a2Q64739 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col11a2Q64739 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC26.9■■□□□ 1.9
Col11a2Q64739 Gm18284-201ENSMUST00000172604 624 ntBASIC26.9■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms