Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gm11687-201ENSMUST00000118911 886 ntBASIC16.37■□□□□ 0.21
Zfp248Q640N4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Zfp248Q640N4 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.37■□□□□ 0.21
Zfp248Q640N4 Gm16437-201ENSMUST00000025669 507 ntBASIC16.37■□□□□ 0.21
Zfp248Q640N4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zfp248Q640N4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Zfp248Q640N4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zfp248Q640N4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Zfp248Q640N4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zfp248Q640N4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zfp248Q640N4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zfp248Q640N4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Zfp248Q640N4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zfp248Q640N4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zfp248Q640N4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Zfp248Q640N4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zfp248Q640N4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zfp248Q640N4 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.35■□□□□ 0.21
Zfp248Q640N4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Zfp248Q640N4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.35■□□□□ 0.21
Zfp248Q640N4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.35■□□□□ 0.21
Zfp248Q640N4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.35■□□□□ 0.21
Zfp248Q640N4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zfp248Q640N4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zfp248Q640N4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zfp248Q640N4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.34■□□□□ 0.21
Zfp248Q640N4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.34■□□□□ 0.21
Zfp248Q640N4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zfp248Q640N4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Zfp248Q640N4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zfp248Q640N4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zfp248Q640N4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zfp248Q640N4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Zfp248Q640N4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zfp248Q640N4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Zfp248Q640N4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Zfp248Q640N4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zfp248Q640N4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zfp248Q640N4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Zfp248Q640N4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zfp248Q640N4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Zfp248Q640N4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.32■□□□□ 0.2
Zfp248Q640N4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Zfp248Q640N4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zfp248Q640N4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zfp248Q640N4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zfp248Q640N4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp248Q640N4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp248Q640N4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp248Q640N4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zfp248Q640N4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Zfp248Q640N4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp248Q640N4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp248Q640N4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.3■□□□□ 0.2
Zfp248Q640N4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp248Q640N4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp248Q640N4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp248Q640N4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.29■□□□□ 0.2
Zfp248Q640N4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp248Q640N4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp248Q640N4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp248Q640N4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp248Q640N4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp248Q640N4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp248Q640N4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp248Q640N4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp248Q640N4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.28■□□□□ 0.2
Zfp248Q640N4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.27■□□□□ 0.2
Zfp248Q640N4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Zfp248Q640N4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zfp248Q640N4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zfp248Q640N4 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.27■□□□□ 0.19
Zfp248Q640N4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zfp248Q640N4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Zfp248Q640N4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms